RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 MENTQ9BUN1 341 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 NTMT1Q9BV86 223 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 COL25A1Q9BXS0 654 aaPredicted RBP5.84□□□□□ -1.47
SDC4P-201ENST00000453285 NUF2Q9BZD4 464 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 WWP1Q9H0M0 922 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 ATG10Q9H0Y0 220 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 TUBB1Q9H4B7 451 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 WDR55Q9H6Y2 383 aaPredicted RBP5.84□□□□□ -1.47
SDC4P-201ENST00000453285 NOL11Q9H8H0 719 aaKnown RBP5.84□□□□□ -1.47
SDC4P-201ENST00000453285 IPPKQ9H8X2 491 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 CARS2Q9HA77 564 aaKnown RBP5.84□□□□□ -1.47
SDC4P-201ENST00000453285 INTS7Q9NVH2 962 aaKnown RBP5.84□□□□□ -1.47
SDC4P-201ENST00000453285 WWOXQ9NZC7 414 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 STOX2Q9P2F5 926 aaPredicted RBP5.84□□□□□ -1.47
SDC4P-201ENST00000453285 OPTCQ9UBM4 332 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 MOSPD1Q9UJG1 213 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 ACSL5Q9ULC5 683 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 PSMD13Q9UNM6 376 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 APOBEC2Q9Y235 224 aaKnown RBP5.84□□□□□ -1.47
SDC4P-201ENST00000453285 KCNK6Q9Y257 313 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 GPSM3Q9Y4H4 160 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 DNAJC15Q9Y5T4 150 aa5.84□□□□□ -1.47
SDC4P-201ENST00000453285 SCN3AQ9NY46 2000 aa5.84□□□□□ -1.48
SDC4P-201ENST00000453285 SPTBP11277 2137 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 KCNE1BA0A087WTH5 132 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 CCDC163A0A0D9SF12 145 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 SPTY2D1-AS1A0A0U1RR47 76 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 A6NCN8 305 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 FCHO1O14526 889 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 SCAMP1O15126 338 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 DIAPH2O60879 1101 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 NDUFS2O75306 463 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 DCTN3O75935 186 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 UBOX5O94941 541 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 WDR47O94967 919 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 EML2O95834 649 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 SLC16A8O95907 504 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 SERPINA6P08185 405 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 THEGLP0DJG4 465 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 T-ENOLP0DO92 83 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 UROSP10746 265 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 ERGP11308 486 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 AOC1P19801 751 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 IDSP22304 550 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 CD27P26842 260 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 AK4P27144 223 aaPredicted RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 MAOBP27338 520 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 RPL10P27635 214 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 MAP4P27816 1152 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 HTR1BP28222 390 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 EPHA3P29320 983 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 THOP1P52888 689 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 HNRNPH2P55795 449 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 CTBSQ01459 385 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 PCDH1Q08174 1060 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 NAE1Q13564 534 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 E2F2Q14209 437 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 FASTKQ14296 549 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 FZD2Q14332 565 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 PDCD2Q16342 344 aaPredicted RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 RBBP7Q16576 425 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 UAP1L1Q3KQV9 507 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 LSM12Q3MHD2 195 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 USP39Q53GS9 565 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 LACTB2Q53H82 288 aaPredicted RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 SPDYAQ5MJ70 313 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 FAM91A1Q658Y4 838 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 DUS1LQ6P1R4 473 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 TSSK4Q6SA08 328 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 WASH2PQ6VEQ5 465 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 SLC36A4Q6YBV0 504 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 GPRIN3Q6ZVF9 776 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 CHSY3Q70JA7 882 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 LARP4Q71RC2 724 aaKnown RBP eCLIP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 LRRC70Q7Z2Q7 622 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 MILR1Q7Z6M3 343 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 YTHDF3Q7Z739 585 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 THOC6Q86W42 341 aaKnown RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 TBC1D21Q8IYX1 336 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 MAML2Q8IZL2 1156 aaPredicted RBP5.83□□□□□ -1.48
SDC4P-201ENST00000453285 KIRREL3Q8IZU9 778 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 LMNTD1Q8N9Z9 388 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 MFSD2AQ8NA29 543 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 PPFIBP2Q8ND30 876 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 OR4F6Q8NGB9 312 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 OR5AR1Q8NGP9 310 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 OR5K2Q8NHB8 316 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 CCL4L1Q8NHW4 92 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 FAM174AQ8TBP5 190 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 ATL1Q8WXF7 558 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 DNASE2BQ8WZ79 361 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 RAD51AP1Q96B01 352 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 PYCR2Q96C36 320 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 KLHDC7BQ96G42 594 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 CDK15Q96Q40 435 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 LRRC37BQ96QE4 947 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 OR4K3Q96R72 315 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 NRTNQ99748 197 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 CCDC28BQ9BUN5 200 aa5.83□□□□□ -1.48
SDC4P-201ENST00000453285 CCDC106Q9BWC9 280 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms