RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 SCN5AQ14524 2016 aa4.28□□□□□ -1.73
LINC00393-202ENST00000452852 A0A0B4J293 547 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TMEM202A6NGA9 273 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 MAGEB17A8MXT2 336 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 SYNCRIPO60506 623 aaKnown RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 NMT2O60551 498 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CLDN7O95471 211 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 SUPT20HL2P0C7V6 817 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 PRLRP16471 622 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ITGB8P26012 769 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CALML3P27482 149 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TCF7P36402 384 aaPredicted RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 PRCPP42785 496 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ME1P48163 572 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 SLC12A2P55011 1212 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 HAND2P61296 217 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 BEX3Q00994 111 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 UBXN1Q04323 297 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 SRSF1Q07955 248 aaKnown RBP eCLIP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 PTK6Q13882 451 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ZNF273Q14593 569 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ALX1Q15699 326 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ZNF260Q3ZCT1 412 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CBWD6Q4V339 395 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 MIDNQ504T8 468 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ZRANB3Q5FWF4 1079 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CBWD3Q5JTY5 395 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ANKRD54Q6NXT1 300 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TMEM71Q6P5X7 295 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TEX38Q6PEX7 206 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 C11orf88Q6PI97 169 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 PPP1R21Q6ZMI0 780 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 RAPH1Q70E73 1250 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ADCK2Q7Z695 626 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TECPR1Q7Z6L1 1165 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 UNC45BQ8IWX7 931 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 MCEMP1Q8IX19 187 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 FBXO16Q8IX29 292 aaPredicted RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 FAM217AQ8IXS0 508 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CNPY4Q8N129 248 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CCAR2Q8N163 923 aaKnown RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 FBXO39Q8N4B4 442 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 IQUBQ8NA54 791 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 SLC4A11Q8NBS3 891 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ZNF548Q8NEK5 533 aaPredicted RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CEP76Q8TAP6 659 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ESR2Q92731 530 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 PTP4A1Q93096 173 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ERGIC1Q969X5 290 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 MOAP1Q96BY2 351 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 VCPIP1Q96JH7 1222 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ZNF558Q96NG5 402 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 SPAG5Q96R06 1193 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 NUDCD1Q96RS6 583 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 MGME1Q9BQP7 344 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TRMOQ9BU70 441 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 SLC25A23Q9BV35 468 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 RTN4RQ9BZR6 473 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 PPIL3Q9H2H8 161 aaKnown RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 SLCO5A1Q9H2Y9 848 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 MMP27Q9H306 513 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CNOT10Q9H9A5 744 aaKnown RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TRPV4Q9HBA0 871 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 PNRC2Q9NPJ4 139 aaKnown RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 MBNL1Q9NR56 388 aaKnown RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CYSLTR2Q9NS75 346 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 DDX43Q9NXZ2 648 aaKnown RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 CYP39A1Q9NYL5 469 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TAS2R14Q9NYV8 317 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 LARSQ9P2J5 1176 aaKnown RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 DNAJB4Q9UDY4 337 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ACAD8Q9UKU7 415 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TBX21Q9UL17 535 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 KCNK7Q9Y2U2 307 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 Q9Y3F1 56 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 NFE2L3Q9Y4A8 694 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 PCDHGA5Q9Y5G8 931 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 LIPGQ9Y5X9 500 aa4.27□□□□□ -1.73
LINC00393-202ENST00000452852 TRIP12Q14669 1992 aaPredicted RBP4.27□□□□□ -1.73
LINC00393-202ENST00000452852 ZMYM6O95789 1325 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 CCDC171Q6TFL3 1326 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 A0A0D9SFI3 127 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 CPED1A4D0V7 1026 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 PROB1E7EW31 1015 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 HIP1O00291 1037 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 MT-ND3P03897 115 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 HSPD1P10809 573 aaKnown RBP4.26□□□□□ -1.73
LINC00393-202ENST00000452852 PDHBP11177 359 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 CSF2RAP15509 400 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 ACHEP22303 614 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 DCTDP32321 178 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 KRT2P35908 639 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 NT5C2P49902 561 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 BMXP51813 675 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 CAPZA1P52907 286 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 MRPS34P82930 218 aaKnown RBP4.26□□□□□ -1.73
LINC00393-202ENST00000452852 ADORA2A-AS1P86434 159 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 SPOCK1Q08629 439 aa4.26□□□□□ -1.73
LINC00393-202ENST00000452852 COASYQ13057 564 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms