RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ZFC3H1O60293 1989 aaKnown RBP13.88□□□□□ -0.19
USP39-207ENST00000450066 GSC2O15499 205 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 FUCA1P04066 466 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 ALDOCP09972 364 aaKnown RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 EZRP15311 586 aaKnown RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 TFF2Q03403 129 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 DMPKQ09013 629 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 GRB7Q14451 532 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 GGTA1PQ4G0N0 100 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 TCHHL1Q5QJ38 904 aaPredicted RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 IL27RAQ6UWB1 636 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 FBXO27Q8NI29 283 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 MAGEC3Q8TD91 643 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 TIMM29Q9BSF4 260 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 ACTR8Q9H981 624 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 LMAN1LQ9HAT1 526 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 ACSL5Q9ULC5 683 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 RNF11Q9Y3C5 154 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 C10orf142B7Z368 130 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 PSMD12O00232 456 aaPredicted RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 RASSF9O75901 435 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 ITPKAP23677 461 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 IMPA1P29218 277 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 CPOXP36551 454 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 ELF3P78545 371 aaPredicted RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 MXRA7P84157 204 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 CYLC2Q14093 348 aaPredicted RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 PTK2BQ14289 1009 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 DNAL1Q4LDG9 190 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 SCIMPQ6UWF3 145 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 SPATA19Q7Z5L4 167 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 SNX32Q86XE0 403 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 L3MBTL4Q8NA19 623 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 OR2T11Q8NH01 316 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 OR56A3Q8NH54 315 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 SCARF2Q96GP6 870 aaPredicted RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 MAGEB10Q96LZ2 347 aaPredicted RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 UHRF1Q96T88 793 aaPredicted RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 RTKNQ9BST9 563 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 INTS7Q9NVH2 962 aaKnown RBP13.87□□□□□ -0.19
USP39-207ENST00000450066 WNT16Q9UBV4 365 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 GIMAP2Q9UG22 337 aa13.87□□□□□ -0.19
USP39-207ENST00000450066 POM121BA6NF01 834 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 FPGTO14772 594 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 LATO43561 262 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 KCNJ13O60928 360 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 PEX11AO75192 247 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 ULK1O75385 1050 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 SEMA4FO95754 770 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 HNRNPA2B1P22626 353 aaKnown RBP13.86□□□□□ -0.19
USP39-207ENST00000450066 ACADVLP49748 655 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 HTR6P50406 440 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 KIAA1024LP59773 190 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 STX1BP61266 288 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 NAE1Q13564 534 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 ABRAXAS2Q15018 415 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 GSTA3Q16772 222 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 Q6ZSR9 355 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 CHST15Q7LFX5 561 aaPredicted RBP13.86□□□□□ -0.19
USP39-207ENST00000450066 THOC6Q86W42 341 aaKnown RBP13.86□□□□□ -0.19
USP39-207ENST00000450066 ADHFE1Q8IWW8 467 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 PGBD3Q8N328 593 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
USP39-207ENST00000450066 OR9A1PQ8NGU1 263 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 MCUR1Q96AQ8 359 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 MYOCQ99972 504 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 UGDHO60701 494 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 IDO1P14902 403 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 CD1EP15812 388 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 STARD6P59095 220 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 PCDH1Q08174 1060 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 FZD5Q13467 585 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 FASTKQ14296 549 aaKnown RBP13.86□□□□□ -0.19
USP39-207ENST00000450066 ATP6AP1LQ52LC2 224 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 PYCR3Q53H96 274 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 TMEM31Q5JXX7 168 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 TRIM46Q7Z4K8 759 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 MYLK4Q86YV6 388 aaPredicted RBP13.86□□□□□ -0.19
USP39-207ENST00000450066 GALNT13Q8IUC8 556 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 HMGCLL1Q8TB92 370 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 ZNF480Q8WV37 535 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 TFGQ92734 400 aaPredicted RBP13.86□□□□□ -0.19
USP39-207ENST00000450066 USP7Q93009 1102 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 MED8Q96G25 268 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 SHDQ96IW2 340 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 MMADHCQ9H3L0 296 aaPredicted RBP13.86□□□□□ -0.19
USP39-207ENST00000450066 KLQ9UEF7 1012 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 ASF1AQ9Y294 204 aa13.86□□□□□ -0.19
USP39-207ENST00000450066 KCNE1BA0A087WTH5 132 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 KRBA1A5PL33 1030 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 IFRD1O00458 451 aaPredicted RBP13.85□□□□□ -0.19
USP39-207ENST00000450066 MANBAO00462 879 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 FFAR3O14843 346 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 GPR42O15529 346 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 WFS1O76024 890 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 KRT6AP02538 564 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 KRT6BP04259 564 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 RPN2P04844 631 aa13.85□□□□□ -0.19
USP39-207ENST00000450066 ACP5P13686 325 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms