RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CYP4Z1Q86W10 505 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 TOP6BLQ8N6T0 577 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 ARRDC4Q8NCT1 418 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 OR13F1Q8NGS4 319 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 OR2T29Q8NH02 315 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 TEPSINQ96N21 525 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 COPS8Q99627 209 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 YTHDF1Q9BYJ9 559 aaKnown RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 CCNB1IP1Q9NPC3 277 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 SDR39U1Q9NRG7 319 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 TRPM3Q9HCF6 1732 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 PRR23D1E9PI22 279 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 MAFKO60675 156 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 C9P02748 559 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 PRR23D2P0DMB1 279 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 AXLP30530 894 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 ZNF135P52742 658 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 CTBSQ01459 385 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 CDK5R2Q13319 367 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 TUBA3CQ13748 450 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 PLEKHG6Q3KR16 790 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 AFTPHQ6ULP2 937 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 LRRC49Q8IUZ0 686 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 TIGD4Q8IY51 512 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 ASCC1Q8N9N2 400 aaKnown RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 POF1BQ8WVV4 589 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 IRGQQ8WZA9 623 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 KAT2AQ92830 837 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 RNFT2Q96EX2 444 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 FAM105AQ9NUU6 356 aa12.15□□□□□ -0.46
UBE3B-204ENST00000449510 AGO1Q9UL18 857 aaKnown RBP12.15□□□□□ -0.46
UBE3B-204ENST00000449510 LOC730098B7Z3J9 87 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 SAP18O00422 153 aaKnown RBP12.15□□□□□ -0.47
UBE3B-204ENST00000449510 IRAK2O43187 625 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 ANXA5P08758 320 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 ATF4P18848 351 aaPredicted RBP12.15□□□□□ -0.47
UBE3B-204ENST00000449510 PROZP22891 400 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 CD52P31358 61 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 SSTR4P31391 388 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 RECQLP46063 649 aaPredicted RBP12.15□□□□□ -0.47
UBE3B-204ENST00000449510 CDC42P60953 191 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 RAB14P61106 215 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 RACK1P63244 317 aaKnown RBP12.15□□□□□ -0.47
UBE3B-204ENST00000449510 RPP38P78345 283 aaKnown RBP12.15□□□□□ -0.47
UBE3B-204ENST00000449510 CDC42EP1Q00587 391 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 TYSND1Q2T9J0 566 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 FAM180BQ6P0A1 224 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 ADAMTSL2Q86TH1 951 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 NETO1Q8TDF5 533 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.47
UBE3B-204ENST00000449510 SPRTNQ9H040 489 aaPredicted RBP12.15□□□□□ -0.47
UBE3B-204ENST00000449510 MMP28Q9H239 520 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 OR51E2Q9H255 320 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 RNF167Q9H6Y7 350 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 CD300AQ9UGN4 299 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 RPS6KA6Q9UK32 745 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 SAMD4AQ9UPU9 718 aaKnown RBP12.15□□□□□ -0.47
UBE3B-204ENST00000449510 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 RAI2Q9Y5P3 530 aa12.15□□□□□ -0.47
UBE3B-204ENST00000449510 A0A0D9SEW6 157 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 TMEM221A6NGB7 291 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 SAGE2PA6NJ88 616 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 H0YAE9 185 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 CTDSP2O14595 271 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 KERAO60938 352 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 MTX2O75431 263 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 SCELO95171 688 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 ALPIP09923 528 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 CCNYL3P0C7X3 344 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 PTNP21246 168 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 DCTP40126 519 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 NKX3-2P78367 333 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 TCEA2Q15560 299 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 ATXN7L2Q5T6C5 722 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-204ENST00000449510 ZNF544Q6NX49 715 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 TPGS1Q6ZTW0 290 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 BBS7Q8IWZ6 715 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 CADM2Q8N3J6 435 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 BRSK1Q8TDC3 778 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 NTAN1Q96AB6 310 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 ZNF486Q96H40 463 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-204ENST00000449510 BEX1Q9HBH7 125 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 GPR83Q9NYM4 423 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 LYVE1Q9Y5Y7 322 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 OAS3Q9Y6K5 1087 aaKnown RBP12.14□□□□□ -0.47
UBE3B-204ENST00000449510 FFAR2O15552 330 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 NDST3O95803 873 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 PPP5CP53041 499 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 RPS7P62081 194 aaKnown RBP12.14□□□□□ -0.47
UBE3B-204ENST00000449510 RPS14P62263 151 aaKnown RBP12.14□□□□□ -0.47
UBE3B-204ENST00000449510 AQP6Q13520 282 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 PON2Q15165 354 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 ADPRMQ3LIE5 342 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 TIMM50Q3ZCQ8 353 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 FBXL22Q6P050 247 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 MAMDC4Q6UXC1 1216 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 DEF8Q6ZN54 512 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 ELMOD2Q8IZ81 293 aa12.14□□□□□ -0.47
UBE3B-204ENST00000449510 AADATQ8N5Z0 425 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms