RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 ALDH9A1P49189 494 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 PGDP52209 483 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 ATP12AP54707 1039 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 HSF2Q03933 536 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 RPA4Q13156 261 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 FRG1Q14331 258 aaKnown RBP10.53□□□□□ -0.72
LINC00342-202ENST00000448494 PIGHQ14442 188 aaPredicted RBP10.53□□□□□ -0.72
LINC00342-202ENST00000448494 TOR1AIP1Q5JTV8 583 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 ELP2Q6IA86 826 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 C17orf107Q6ZR85 190 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 NT5DC4Q86YG4 428 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 EIF4E3Q8N5X7 224 aaKnown RBP10.53□□□□□ -0.72
LINC00342-202ENST00000448494 CDYL2Q8N8U2 506 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 TRIM43Q96BQ3 446 aaPredicted RBP10.53□□□□□ -0.72
LINC00342-202ENST00000448494 RBM18Q96H35 190 aaKnown RBP10.53□□□□□ -0.72
LINC00342-202ENST00000448494 MCCC1Q96RQ3 725 aaPredicted RBP10.53□□□□□ -0.72
LINC00342-202ENST00000448494 ZBTB18Q99592 522 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 COPS4Q9BT78 406 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 LMAN2LQ9H0V9 348 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 ALG2Q9H553 416 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 VAT1LQ9HCJ6 419 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 CMTM6Q9NX76 183 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 SLC9A2Q9UBY0 812 aa10.53□□□□□ -0.72
LINC00342-202ENST00000448494 SLC12A8A0AV02 714 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ZNF729A6NN14 1252 aaPredicted RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 WASH4PA8MWX3 477 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 POLRMTO00411 1230 aaKnown RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 PCDH17O14917 1159 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 FABP7O15540 132 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SELENOFO60613 162 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 CABYRO75952 493 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 NDUFB10O96000 172 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ACAA1P09110 424 aaPredicted RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 EIF2S3P41091 472 aaKnown RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SPIRE1Q08AE8 756 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 FGFBP1Q14512 234 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 C21orf62-AS1Q17RA5 79 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 EIF2S3LQ2VIR3 472 aaKnown RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 PAN3Q58A45 887 aaKnown RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 CDKL4Q5MAI5 379 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 PDZK1Q5T2W1 519 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 KIAA1614Q5VZ46 1190 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SLC25A25Q6KCM7 469 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 TMPRSS11AQ6ZMR5 421 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 RASSF6Q6ZTQ3 369 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 CCDC149Q6ZUS6 474 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SLC46A3Q7Z3Q1 461 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 CLEC14AQ86T13 490 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 PROSER1Q86XN7 944 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SIAH1Q8IUQ4 282 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 NIPA2Q8N8Q9 360 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 IL17RCQ8NAC3 791 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ZBTB38Q8NAP3 1195 aaPredicted RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 RDH13Q8NBN7 331 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 FBXO30Q8TB52 745 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 CNIH3Q8TBE1 160 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SFT2D1Q8WV19 159 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 PYCR2Q96C36 320 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 COQ8BQ96D53 544 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 CCDC126Q96EE4 140 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 DPCDQ9BVM2 203 aaPredicted RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 NMRAL1Q9HBL8 299 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SMURF1Q9HCE7 757 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ZNF358Q9NW07 568 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 KCMF1Q9P0J7 381 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 COQ4Q9Y3A0 265 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 RNF215Q9Y6U7 377 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 RGPD2P0DJD1 1756 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SCN11AQ9UI33 1791 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 TNS3Q68CZ2 1445 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 TTLL8A6PVC2 850 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 BCKDKO14874 412 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 MMP20O60882 483 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SLC43A1O75387 559 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 USP2O75604 605 aaPredicted RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 WDR47O94967 919 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 LTFP02788 710 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 HEXBP07686 556 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ADRB1P08588 477 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SPATA31C1P0DKV0 1188 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 KCNJ5P48544 419 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 RIDAP52758 137 aaKnown RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 IL5RAQ01344 420 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 EMC2Q15006 297 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ZNF79Q15937 498 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 PYCR3Q53H96 274 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ARHGAP17Q68EM7 881 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 PPP1R18Q6NYC8 613 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ZC3HC1Q86WB0 502 aaKnown RBP10.52□□□□□ -0.73
LINC00342-202ENST00000448494 KRT78Q8N1N4 520 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 SPPL2BQ8TCT7 592 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 ASZ1Q8WWH4 475 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 NELL1Q92832 810 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 RTP4Q96DX8 246 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 NSMCE2Q96MF7 247 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 HS6ST2Q96MM7 605 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 QRFPRQ96P65 431 aa10.52□□□□□ -0.73
LINC00342-202ENST00000448494 TMEM8AQ9HCN3 771 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms