RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 F11P03951 625 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SUOXP51687 545 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 TMEM198Q66K66 360 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 RPS27LQ71UM5 84 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 GAREM2Q75VX8 874 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 AGAP11Q8TF27 550 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CLPTM1LQ96KA5 538 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 FAM83CQ9BQN1 747 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ROGDIQ9GZN7 287 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CWH43Q9H720 699 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ATP6V1HQ9UI12 483 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 PLAGL1Q9UM63 463 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 MAP4K5Q9Y4K4 846 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 M0R3G1 203 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 GTPBP1O00178 669 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 TNFRSF10BO14763 440 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 B3GALT2O43825 422 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 FAM58BPP0C7Q3 252 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ADRB3P13945 408 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 HSPB3Q12988 150 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ZNF234Q14588 700 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 FBXO43Q4G163 708 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 RFTN2Q52LD8 501 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 NADSYN1Q6IA69 706 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 GLYATQ6IB77 296 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 DPY19L2P1Q6NXN4 242 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CRTC1Q6UUV9 634 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 GLB1L3Q8NCI6 653 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SETD9Q8NE22 299 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 PHF10Q8WUB8 498 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SLC22A12Q96S37 553 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 GTPBP2Q9BX10 602 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ZNF576Q9H609 170 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 PDP2Q9P2J9 529 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ACSL5Q9ULC5 683 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 BHMG1C9JSJ3 638 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 AP3D1O14617 1153 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 OAS1P00973 400 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 IL6P05231 212 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SRSF11Q05519 484 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 AMIGO2Q86SJ2 522 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 GKN2Q86XP6 184 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 OR2T3Q8NH03 318 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 METTL21AQ8WXB1 218 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SLC9A6Q92581 669 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 RBM18Q96H35 190 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 MYRFLQ96LU7 910 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 AKTIPQ9H8T0 292 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SPO11Q9Y5K1 396 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 NRXN2Q9P2S2 1712 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 MYO18AQ92614 2054 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 LOXHD1Q8IVV2 1947 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 A0A0J9YVX5 310 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 STX16-NPEPL1H3BU86 382 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 STX16O14662 325 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 KLF11O14901 512 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 FAM20BO75063 409 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CNOT3O75175 753 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CPN2P22792 545 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 RPL6Q02878 288 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 FAM78AQ5JUQ0 283 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 KDELC1Q6UW63 502 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SUSD1Q6UWL2 747 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 MBOAT1Q6ZNC8 495 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 AVL9Q8NBF6 648 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 WDR92Q96MX6 357 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 OR2M4Q96R27 311 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CD244Q9BZW8 370 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CDH22Q9UJ99 828 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SAMHD1Q9Y3Z3 626 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 TYROBPO43914 113 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 VEGFDO43915 354 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 OR6A2O95222 327 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CYP17A1P05093 508 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ANPEPP15144 967 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 IRS1P35568 1242 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 NEK2P51955 445 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 PGGT1BP53609 377 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SMIM11AP58511 58 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 LIPEQ05469 1076 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 RUNX1T1Q06455 604 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SLC9A5Q14940 896 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ERICH5Q6P6B1 374 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 KIAA2013Q8IYS2 634 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 REXO5Q96IC2 774 aaKnown RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 ZNF184Q99676 751 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 TRIM39Q9HCM9 518 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 SPATA6Q9NWH7 488 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-213ENST00000448038 PCDHGB3Q9Y5G1 929 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 TCRBV5S1A1TA0A578 114 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 ELOVL7A1L3X0 281 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 PEX1O43933 1283 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CCNYL3P0C7X3 344 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 DRD1P21728 446 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 AGTR2P50052 363 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CLCN4P51793 760 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 DEF8Q6ZN54 512 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 CEP97Q8IW35 865 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 OFCC1Q8IZS5 231 aa7.23□□□□□ -1.25
SYNE1-213ENST00000448038 SLC13A3Q8WWT9 602 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms