RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CDH12P55289 794 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 MZT2AQ6P582 158 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 ZMIZ2Q8NF64 920 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 OR52J3Q8NH60 311 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 TAMM41Q96BW9 452 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 AP2M1Q96CW1 435 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 KLHL32Q96NJ5 620 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 CRISPLD1Q9H336 500 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 CAPN10Q9HC96 672 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 SMOXQ9NWM0 555 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 TBC1D14Q9P2M4 693 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 VPS29Q9UBQ0 182 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 PEX16Q9Y5Y5 336 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 LRRC14BA6NHZ5 514 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 NME4O00746 187 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 FMO3P31513 532 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 TMBIM6P55061 237 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 PLEKHG6Q3KR16 790 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 AP3S1Q92572 193 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 HTRA1Q92743 480 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 RPL10LQ96L21 214 aaKnown RBP16.29■□□□□ 0.2
TCOF1-206ENST00000445265 MTERF1Q99551 399 aaKnown RBP16.29■□□□□ 0.2
TCOF1-206ENST00000445265 ANKRD60Q9BZ19 345 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 RNF208Q9H0X6 261 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 ZNF232Q9UNY5 417 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 PTGDR2Q9Y5Y4 395 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 SLC28A2O43868 658 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 CLPXO76031 633 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 PSMA1P25786 263 aaKnown RBP16.29■□□□□ 0.2
TCOF1-206ENST00000445265 GDF5P43026 501 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 CLCN4P51793 760 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 LAPTM5Q13571 262 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 OR4D1Q15615 310 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 PDE12Q6L8Q7 609 aaKnown RBP16.29■□□□□ 0.2
TCOF1-206ENST00000445265 XKR5Q6UX68 686 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 SCML4Q8N228 414 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 MYRFLQ96LU7 910 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 CD244Q9BZW8 370 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 SDR39U1Q9NRG7 319 aaPredicted RBP16.29■□□□□ 0.2
TCOF1-206ENST00000445265 CD84Q9UIB8 345 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 C1QTNF3-AMACRE9PGA6 284 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 TOR1BO14657 336 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 AURKAO14965 403 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 SPATA31D3P0C874 917 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 FPR1P21462 350 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 ALDH4A1P30038 563 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 NOGQ13253 232 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 ZNF789Q5FWF6 425 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 FAM171BQ6P995 826 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 KDELC1Q6UW63 502 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 SPATA31D4Q6ZUB0 917 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 TREX1Q9NSU2 369 aa16.29■□□□□ 0.2
TCOF1-206ENST00000445265 SOCS2O14508 198 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 GGT5P36269 586 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 PPP1R8Q12972 351 aaKnown RBP16.28■□□□□ 0.2
TCOF1-206ENST00000445265 GPR153Q6NV75 609 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 PHYKPLQ8IUZ5 450 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 PYCR2Q96C36 320 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 AIF1LQ9BQI0 150 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 ACAT2Q9BWD1 397 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 TBCCD1Q9NVR7 557 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 RIMKLBQ9ULI2 386 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 WBP11Q9Y2W2 641 aaKnown RBP16.28■□□□□ 0.2
TCOF1-206ENST00000445265 MAP4K5Q9Y4K4 846 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 COL4A1P02462 1669 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 HPRP00739 348 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 MYF6P23409 242 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 SEPHS1P49903 392 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 RAB39AQ14964 217 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 DPP10Q8N608 796 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 SUV39H2Q9H5I1 410 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 IRGMA1A4Y4 181 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 CCDC182A6NF36 153 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 EFCAB9A8MZ26 197 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 IL7RP16871 459 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 ENGP17813 658 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 NOS3P29474 1203 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 HLCSP50747 726 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 RAB41Q5JT25 222 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 KCTD11Q693B1 232 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 OR4F3Q6IEY1 312 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 NEK5Q6P3R8 708 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 ARHGAP12Q8IWW6 846 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 HEPHQ9BQS7 1158 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 CHCHD6Q9BRQ6 235 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 ARNT2Q9HBZ2 717 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 TMEM181Q9P2C4 612 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 RPS6KB2Q9UBS0 482 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 SEC14L3Q9UDX4 400 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 PGAP2Q9UHJ9 254 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 RIMS3Q9UJD0 308 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 AREL1O15033 823 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 UGT2B17O75795 530 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 RPLP0P05388 317 aaKnown RBP16.28■□□□□ 0.2
TCOF1-206ENST00000445265 CD36P16671 472 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 PRKCZQ05513 592 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 IFNL1Q8IU54 200 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 DCAF4L2Q8NA75 395 aa16.28■□□□□ 0.2
TCOF1-206ENST00000445265 YIPF1Q9Y548 306 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms