RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 MS4A2Q01362 244 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 NAIF1Q69YI7 327 aaPredicted RBP15.27■□□□□ 0.04
SNX13-204ENST00000444712 TLDC1Q6P9B6 456 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 PARM1Q6UWI2 310 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 CHPFQ8IZ52 775 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 DPP10Q8N608 796 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 ST13P5Q8NFI4 369 aaPredicted RBP15.27■□□□□ 0.04
SNX13-204ENST00000444712 HM13Q8TCT9 377 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 S1PR5Q9H228 398 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 DPEP2Q9H4A9 486 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 SLC22A14Q9Y267 594 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 TMED5Q9Y3A6 229 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 KCNE1BA0A087WTH5 132 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 PRORSD1PA6NEY8 169 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 H3BNX3 289 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 ARNTLO00327 626 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 SEC22BO75396 215 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 C8BP07358 591 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 G6PDP11413 515 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 JUPP14923 745 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 ACPPP15309 386 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 TCN1P20061 433 aaPredicted RBP15.27■□□□□ 0.03
SNX13-204ENST00000444712 PBLDP30039 288 aaPredicted RBP15.27■□□□□ 0.03
SNX13-204ENST00000444712 HALP42357 657 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 PFN3P60673 137 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 PCDH1Q08174 1060 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 AGERQ15109 404 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 CST6Q15828 149 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 CPSF6Q16630 551 aaKnown RBP eCLIP15.27■□□□□ 0.03
SNX13-204ENST00000444712 ZNF658BQ4V348 819 aaPredicted RBP15.27■□□□□ 0.03
SNX13-204ENST00000444712 RFTN2Q52LD8 501 aaPredicted RBP15.27■□□□□ 0.03
SNX13-204ENST00000444712 NEK5Q6P3R8 708 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 AGTRAPQ6RW13 159 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 SPATA24Q86W54 205 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 RGL4Q8IZJ4 473 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 PQLC1Q8N2U9 271 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 ZNF513Q8N8E2 541 aaPredicted RBP15.27■□□□□ 0.03
SNX13-204ENST00000444712 CATSPER1Q8NEC5 780 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 CSGALNACT1Q8TDX6 532 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 FGF14Q92915 247 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 LRGUKQ96M69 825 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 ZNF570Q96NI8 536 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 HBEGFQ99075 208 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 FBRSQ9HAH7 460 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 STOX2Q9P2F5 926 aaPredicted RBP15.27■□□□□ 0.03
SNX13-204ENST00000444712 FAM8A1Q9UBU6 413 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 LRCH1Q9Y2L9 728 aa15.27■□□□□ 0.03
SNX13-204ENST00000444712 KLHL33A6NCF5 533 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 FXYD1O00168 92 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 PLK4O00444 970 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 CLGNO14967 610 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 LILRB5O75023 590 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 RPSAP08865 295 aaKnown RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 PRPS2P11908 318 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 VARSP26640 1264 aaKnown RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 PREPP48147 710 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 PNLIPRP1P54315 467 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 MRPS22P82650 360 aaKnown RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 IRAK1BP1Q5VVH5 260 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 THOC6Q86W42 341 aaKnown RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 ZUFSPQ96AP4 578 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 CHFRQ96EP1 664 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 TEX37Q96LM6 180 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 DPY30Q9C005 99 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 GPRC5BQ9NZH0 403 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 LMCD1Q9NZU5 365 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 CLEC1BQ9P126 229 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 ATXN10Q9UBB4 475 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 HCN2Q9UL51 889 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 CHD7Q9P2D1 2997 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 ANKRD28O15084 1053 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 PEX1O43933 1283 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 DNAJA2O60884 412 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 PDYNP01213 254 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 SLC6A2P23975 617 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 TEAD1P28347 426 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 HNF4AP41235 474 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 GTF2A1P52655 376 aaPredicted RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 RHDQ02161 417 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 IRF8Q02556 426 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 CSTF3Q12996 717 aaKnown RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 RPA4Q13156 261 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 CHIT1Q13231 466 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 TLR1Q15399 786 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 ZXDCQ2QGD7 858 aaPredicted RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 TIGD2Q4W5G0 525 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 ZNF776Q68DI1 518 aaPredicted RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 DHFR2Q86XF0 187 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 SLC15A3Q8IY34 581 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 CFAP206Q8IYR0 622 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 GOLM1Q8NBJ4 401 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 OR2L2Q8NH16 312 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 OR56A3Q8NH54 315 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 PYCR2Q96C36 320 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 CMTM7Q96FZ5 175 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 DUS3LQ96G46 650 aaKnown RBP15.26■□□□□ 0.03
SNX13-204ENST00000444712 COX14Q96I36 57 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 EFHD1Q9BUP0 239 aa15.26■□□□□ 0.03
SNX13-204ENST00000444712 KLHL4Q9C0H6 718 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms