RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 MAGEC3Q8TD91 643 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 SKA2Q8WVK7 121 aaPredicted RBP18.02■□□□□ 0.48
CCDC188-202ENST00000444532 RAD51AP1Q96B01 352 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 LRRC39Q96DD0 335 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 MENTQ9BUN1 341 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 RAB11FIP5Q9BXF6 653 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 GPN2Q9H9Y4 310 aaPredicted RBP18.02■□□□□ 0.48
CCDC188-202ENST00000444532 FBXO6Q9NRD1 293 aaPredicted RBP18.02■□□□□ 0.48
CCDC188-202ENST00000444532 LNPEPQ9UIQ6 1025 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 PLAGL1Q9UM63 463 aa18.02■□□□□ 0.48
CCDC188-202ENST00000444532 LOC101059948A0A1B0GTJ6 334 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 EFCAB8A8MWE9 144 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 BANF1O75531 89 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 SEC31AO94979 1220 aaKnown RBP18.01■□□□□ 0.47
CCDC188-202ENST00000444532 MATN4O95460 622 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 C1orf105O95561 183 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 CD9P21926 228 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 ITGA8P53708 1063 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 GRB7Q14451 532 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 SLC5A12Q1EHB4 618 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 KIAA1614Q5VZ46 1190 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 SYT10Q6XYQ8 523 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 MAATS1Q7Z4T9 603 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 SPATA4Q8NEY3 305 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 FLVCR1-AS1Q8TAF5 88 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 KCNJ9Q92806 393 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 SLC22A18Q96BI1 424 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 SLC45A3Q96JT2 553 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 BBC3Q96PG8 261 aaPredicted RBP18.01■□□□□ 0.47
CCDC188-202ENST00000444532 SLC12A9Q9BXP2 914 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 CHRNA10Q9GZZ6 450 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 IARS2Q9NSE4 1012 aaKnown RBP18.01■□□□□ 0.47
CCDC188-202ENST00000444532 SPHK1Q9NYA1 384 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 GALPQ9UBC7 116 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 PADI1Q9ULC6 663 aa18.01■□□□□ 0.47
CCDC188-202ENST00000444532 A0A0J9YY10 115 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 ISM1B1AKI9 464 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 RASGRF2O14827 1237 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 HAUS5O94927 633 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 TIAF1O95411 115 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 ITGB2P05107 769 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 CLCN7P51798 805 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 ARL4CP56559 192 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 HIF1AQ16665 826 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 TTLL9Q3SXZ7 439 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 ZNF549Q6P9A3 640 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 IGDCC3Q8IVU1 814 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 UNC5BQ8IZJ1 945 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 RAB42Q8N4Z0 105 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 C2CD4AQ8NCU7 369 aaPredicted RBP18■□□□□ 0.47
CCDC188-202ENST00000444532 BBOF1Q8ND07 529 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 OR2L8Q8NGY9 312 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 TTC9Q92623 222 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 FAM136AQ96C01 138 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 TCTN2Q96GX1 697 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 TRIM31Q9BZY9 425 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 SERTAD3Q9UJW9 196 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 SLC39A10Q9ULF5 831 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 NFS1Q9Y697 457 aa18■□□□□ 0.47
CCDC188-202ENST00000444532 FAM187AA6NFU0 413 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 ZNF891A8MT65 544 aaPredicted RBP17.99■□□□□ 0.47
CCDC188-202ENST00000444532 SCRG1O75711 98 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 ERVK-10P10266 1014 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 PVRP15151 417 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 ELK3P41970 407 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 TAF1BQ53T94 588 aaPredicted RBP17.99■□□□□ 0.47
CCDC188-202ENST00000444532 ACSBG2Q5FVE4 666 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 CNSTQ6PJW8 725 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 KIAA0408Q6ZU52 694 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 NEK10Q6ZWH5 1172 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 TMEM126BQ8IUX1 230 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 C19orf47Q8N9M1 422 aaKnown RBP17.99■□□□□ 0.47
CCDC188-202ENST00000444532 LINC01555Q8NAE3 123 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 ZC3H7BQ9UGR2 993 aaKnown RBP17.99■□□□□ 0.47
CCDC188-202ENST00000444532 DHRS7Q9Y394 339 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 PCDHB3Q9Y5E6 796 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 TEX264Q9Y6I9 313 aa17.99■□□□□ 0.47
CCDC188-202ENST00000444532 EIF4E1BA6NMX2 242 aaKnown RBP17.98■□□□□ 0.47
CCDC188-202ENST00000444532 TMEM150CB9EJG8 249 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 TP73O15350 636 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 CPNE3O75131 537 aaKnown RBP17.98■□□□□ 0.47
CCDC188-202ENST00000444532 NTRK1P04629 796 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 PEBP1P30086 187 aaKnown RBP17.98■□□□□ 0.47
CCDC188-202ENST00000444532 RPL21P46778 160 aaKnown RBP17.98■□□□□ 0.47
CCDC188-202ENST00000444532 MPP1Q00013 466 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 CBLBQ13191 982 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 KLHL38Q2WGJ6 581 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 PCSK4Q6UW60 755 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 CDHR3Q6ZTQ4 885 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 GALNT7Q86SF2 657 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 TRIM73Q86UV7 250 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 CNTN4Q8IWV2 1026 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 HMGCLL1Q8TB92 370 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 SLC39A7Q92504 469 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 INPP5DQ92835 1189 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 CERS2Q96G23 380 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 PWWP2AQ96N64 755 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 ERP44Q9BS26 406 aa17.98■□□□□ 0.47
CCDC188-202ENST00000444532 AARSD1Q9BTE6 412 aaKnown RBP17.98■□□□□ 0.47
CCDC188-202ENST00000444532 KLHL25Q9H0H3 589 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms