RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 BTN3A3O00478 584 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 USP1O94782 785 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 NTRK1P04629 796 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 FURINP09958 794 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 FMO4P31512 558 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 SHMT2P34897 504 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 ERV3-1Q14264 604 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 WHAMMP3Q1A5X7 153 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 ZNF470Q6ECI4 717 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 TBC1D21Q8IYX1 336 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 SLC22A15Q8IZD6 547 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 AGGF1Q8N302 714 aaeCLIP13.57□□□□□ -0.24
TREX1-202ENST00000444177 SPATA4Q8NEY3 305 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 OR5K2Q8NHB8 316 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 CFAP61Q8NHU2 1237 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 C9orf43Q8TAL5 461 aaPredicted RBP13.57□□□□□ -0.24
TREX1-202ENST00000444177 GSDMBQ8TAX9 411 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 CT55Q8WUE5 264 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 SKA2Q8WVK7 121 aaPredicted RBP13.57□□□□□ -0.24
TREX1-202ENST00000444177 LPGAT1Q92604 370 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 ABHD17AQ96GS6 310 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 PPM1MQ96MI6 270 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 TRIM51Q9BSJ1 452 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 AKIRIN1Q9H9L7 192 aaPredicted RBP13.57□□□□□ -0.24
TREX1-202ENST00000444177 C20orf96Q9NUD7 363 aaPredicted RBP13.57□□□□□ -0.24
TREX1-202ENST00000444177 POLG2Q9UHN1 485 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
TREX1-202ENST00000444177 CDYLQ9Y232 598 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 CRYL1Q9Y2S2 319 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 PCDHGA6Q9Y5G7 932 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 KCNMB2Q9Y691 235 aa13.57□□□□□ -0.24
TREX1-202ENST00000444177 PTPN13Q12923 2485 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 PIPSLA2A3N6 862 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 C2orf74A8MZ97 194 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 KDM1AO60341 852 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 NIPSNAP2O75323 286 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 GPC4O75487 556 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 CREG1O75629 220 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 URI1O94763 535 aaPredicted RBP13.56□□□□□ -0.24
TREX1-202ENST00000444177 ZBTB11O95625 1053 aaPredicted RBP13.56□□□□□ -0.24
TREX1-202ENST00000444177 RECKO95980 971 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 RPN2P04844 631 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 F7P08709 466 aaPredicted RBP13.56□□□□□ -0.24
TREX1-202ENST00000444177 AOAHP28039 575 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 TUBB4BP68371 445 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 DHX9Q08211 1270 aaKnown RBP13.56□□□□□ -0.24
TREX1-202ENST00000444177 DNASE1L3Q13609 305 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 LONRF1Q17RB8 773 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 DNAJC21Q5F1R6 531 aaKnown RBP13.56□□□□□ -0.24
TREX1-202ENST00000444177 TMTC4Q5T4D3 741 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 NEPROQ6NW34 567 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 FAM199XQ6PEV8 388 aaPredicted RBP13.56□□□□□ -0.24
TREX1-202ENST00000444177 OTOAQ7RTW8 1153 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 TMEM135Q86UB9 458 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 HOOK3Q86VS8 718 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 CILP2Q8IUL8 1156 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 CARFQ8N187 725 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.56□□□□□ -0.24
TREX1-202ENST00000444177 FAM136AQ96C01 138 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 TCF12Q99081 682 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 INTS10Q9NVR2 710 aaKnown RBP13.56□□□□□ -0.24
TREX1-202ENST00000444177 ACTR10Q9NZ32 417 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 VPS9D1Q9Y2B5 631 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 LRRK2Q5S007 2527 aa13.56□□□□□ -0.24
TREX1-202ENST00000444177 ZCWPW2A0A1B0GU75 182 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 CDC14CA4D256 554 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 SLC9B1P1A6NJY1 282 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 C21orf140B9A014 251 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 E5RI56 91 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 KPNA5O15131 536 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 TTI1O43156 1089 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 BANF1O75531 89 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 ESR1P03372 595 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 PGAM1P18669 254 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 SLC1A2P43004 574 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 TLE1Q04724 770 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 ABRQ12979 859 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 GPR19Q15760 415 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 UNC5DQ6UXZ4 953 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 UNC5AQ6ZN44 842 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 CENPUQ71F23 418 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 DCUN1D3Q8IWE4 304 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 DENND6AQ8IWF6 608 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 OR8K5Q8NH50 307 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 ZNF501Q96CX3 271 aaPredicted RBP13.55□□□□□ -0.24
TREX1-202ENST00000444177 SIGLEC10Q96LC7 697 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 BIRC8Q96P09 236 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 KRT12Q99456 494 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 TRIM31Q9BZY9 425 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 TWSG1Q9GZX9 223 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 FBXO6Q9NRD1 293 aaPredicted RBP13.55□□□□□ -0.24
TREX1-202ENST00000444177 C1GALT1Q9NS00 363 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 CIDEBQ9UHD4 219 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 POLHQ9Y253 713 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 BTRCQ9Y297 605 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
TREX1-202ENST00000444177 MAST4O15021 2626 aa13.54□□□□□ -0.24
TREX1-202ENST00000444177 H3BMM5 538 aa13.54□□□□□ -0.24
TREX1-202ENST00000444177 SMAPO00193 183 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms