RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 RAD51AP1Q96B01 352 aa18.2■□□□□ 0.5
ATPAF2-201ENST00000444058 RAB11FIP5Q9BXF6 653 aa18.2■□□□□ 0.5
ATPAF2-201ENST00000444058 SPHK1Q9NYA1 384 aa18.2■□□□□ 0.5
ATPAF2-201ENST00000444058 A0A0J9YY10 115 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 ZCWPW2A0A1B0GU75 182 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 USP27XA6NNY8 438 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 GOLGA8MH3BSY2 632 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 FAM87AP0C7U9 286 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 PVRP15151 417 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 OAS2P29728 719 aaKnown RBP18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 CCNFP41002 786 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 GBX1Q14549 363 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 RNASEH2BQ5TBB1 312 aaKnown RBP18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 CDHR3Q6ZTQ4 885 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 CENPUQ71F23 418 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 PCGF5Q86SE9 256 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 ZNF605Q86T29 641 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 C19orf47Q8N9M1 422 aaKnown RBP18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 OR1L3Q8NH93 324 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 CT55Q8WUE5 264 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 ZNF669Q96BR6 464 aaPredicted RBP18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 SIGLEC10Q96LC7 697 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 STARD5Q9NSY2 213 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 ZNF462Q96JM2 2506 aa18.19■□□□□ 0.5
ATPAF2-201ENST00000444058 TMEM150CB9EJG8 249 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 CREG1O75629 220 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 FKBP9O95302 570 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 S1PR4O95977 384 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 HBQ1P09105 142 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 PRKAR1AP10644 381 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 PKMP14618 531 aaKnown RBP18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 FMO4P31512 558 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 RORAP35398 523 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 ITGA1P56199 1179 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 GNG11P61952 73 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 GPS2Q13227 327 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 THOC5Q13769 683 aaKnown RBP18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 PTK6Q13882 451 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 IZUMO3Q5VZ72 239 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 LINC01555Q8NAE3 123 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 SLC38A9Q8NBW4 561 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 OR2L8Q8NGY9 312 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 CFAP61Q8NHU2 1237 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 HMGCLL1Q8TB92 370 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 CALML6Q8TD86 181 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 MAGEC3Q8TD91 643 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 APOBEC4Q8WW27 367 aaKnown RBP18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 FOPNLQ96NB1 174 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 RUNDC3BQ96NL0 473 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 DPH2Q9BQC3 489 aaPredicted RBP18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 DDX47Q9H0S4 455 aaKnown RBP18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 KLHL42Q9P2K6 505 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 PLAGL1Q9UM63 463 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 CRYL1Q9Y2S2 319 aa18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 MRPS18BQ9Y676 258 aaKnown RBP18.18■□□□□ 0.5
ATPAF2-201ENST00000444058 SPTA1P02549 2419 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 ISM1B1AKI9 464 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 E7EQ34 232 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 MEN1O00255 615 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 RASGRF2O14827 1237 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 KATNA1O75449 491 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 MATN4O95460 622 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 C1orf105O95561 183 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 CYP2A7P20853 494 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 PTPN4P29074 926 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 GABRA4P48169 554 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 POLE2P56282 527 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 RPS15P62841 145 aaKnown RBP18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 LONRF1Q17RB8 773 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 ZNF470Q6ECI4 717 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 C16orf46Q6P387 395 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 SYDE1Q6ZW31 735 aaPredicted RBP18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 CREG2Q8IUH2 290 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 GPR135Q8IZ08 494 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 DSELQ8IZU8 1212 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 AGGF1Q8N302 714 aaeCLIP18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 RAB42Q8N4Z0 105 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 MR1Q95460 341 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 RNF31Q96EP0 1072 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 TRIM56Q9BRZ2 755 aaKnown RBP18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 KLHL25Q9H0H3 589 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 SLC25A18Q9H1K4 315 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 ACTR5Q9H9F9 607 aaPredicted RBP18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 AKIRIN1Q9H9L7 192 aaPredicted RBP18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 FAM60AQ9NP50 221 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 SLC39A10Q9ULF5 831 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 SAR1BQ9Y6B6 198 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 MAD1L1Q9Y6D9 718 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 AP1M2Q9Y6Q5 423 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 FAM169AQ9Y6X4 670 aa18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 TLN1Q9Y490 2541 aaKnown RBP18.17■□□□□ 0.5
ATPAF2-201ENST00000444058 H3BMH7 237 aa18.16■□□□□ 0.5
ATPAF2-201ENST00000444058 SMAPO00193 183 aa18.16■□□□□ 0.5
ATPAF2-201ENST00000444058 DNALI1O14645 258 aaPredicted RBP18.16■□□□□ 0.5
ATPAF2-201ENST00000444058 NIPSNAP2O75323 286 aa18.16■□□□□ 0.5
ATPAF2-201ENST00000444058 RAB40ALP0C0E4 278 aa18.16■□□□□ 0.5
ATPAF2-201ENST00000444058 CHRM3P20309 590 aa18.16■□□□□ 0.5
ATPAF2-201ENST00000444058 PEBP1P30086 187 aaKnown RBP18.16■□□□□ 0.5
ATPAF2-201ENST00000444058 ZIC1Q15915 447 aa18.16■□□□□ 0.5
ATPAF2-201ENST00000444058 SYVN1Q86TM6 617 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms