RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PEX13Q92968 403 aa13.32□□□□□ -0.28
PTPRE-203ENST00000442830 GBP5Q96PP8 586 aa13.32□□□□□ -0.28
PTPRE-203ENST00000442830 OR2A14Q96R47 310 aa13.32□□□□□ -0.28
PTPRE-203ENST00000442830 RAB11FIP5Q9BXF6 653 aa13.32□□□□□ -0.28
PTPRE-203ENST00000442830 ILKAPQ9H0C8 392 aaPredicted RBP13.32□□□□□ -0.28
PTPRE-203ENST00000442830 C10orf88Q9H8K7 445 aa13.32□□□□□ -0.28
PTPRE-203ENST00000442830 MRM3Q9HC36 420 aaKnown RBP13.32□□□□□ -0.28
PTPRE-203ENST00000442830 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
PTPRE-203ENST00000442830 NXT1Q9UKK6 140 aaKnown RBP13.32□□□□□ -0.28
PTPRE-203ENST00000442830 RIMKLBQ9ULI2 386 aa13.32□□□□□ -0.28
PTPRE-203ENST00000442830 CNTRLQ7Z7A1 2325 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 UTP20O75691 2785 aaKnown RBP13.31□□□□□ -0.28
PTPRE-203ENST00000442830 HEATR9A2RTY3 570 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 MROH6A6NGR9 719 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 H3BMH7 237 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 ALBP02768 609 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 PVRP15151 417 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 ITGAXP20702 1163 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 RAB28P51157 221 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 CDH17Q12864 832 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 POU6F1Q14863 301 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 NKAIN1Q4KMZ8 207 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 ZC3H12BQ5HYM0 836 aaKnown RBP13.31□□□□□ -0.28
PTPRE-203ENST00000442830 AARS2Q5JTZ9 985 aaKnown RBP13.31□□□□□ -0.28
PTPRE-203ENST00000442830 AFTPHQ6ULP2 937 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 NLRP9Q7RTR0 991 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 LURAP1LQ8IV03 231 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 CLDN19Q8N6F1 224 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 NAT14Q8WUY8 206 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 MFRPQ9BY79 579 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 FRMD8P1Q9BZ68 369 aaPredicted RBP13.31□□□□□ -0.28
PTPRE-203ENST00000442830 XKR8Q9H6D3 395 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 WDR54Q9H977 334 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 CASS4Q9NQ75 786 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 AGPAT4Q9NRZ5 378 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 P4HTMQ9NXG6 502 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 IL1RAPL1Q9NZN1 696 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 AMFRQ9UKV5 643 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 SLC5A6Q9Y289 635 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 TDRKHQ9Y2W6 561 aaKnown RBP13.31□□□□□ -0.28
PTPRE-203ENST00000442830 EPN1Q9Y6I3 576 aaPredicted RBP13.31□□□□□ -0.28
PTPRE-203ENST00000442830 CREBBPQ92793 2442 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 MYO9AB2RTY4 2548 aa13.31□□□□□ -0.28
PTPRE-203ENST00000442830 POLEQ07864 2286 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 DOCK10Q96BY6 2186 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 A0A1B0GX78 115 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 SLC5A10A0PJK1 596 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 ISM1B1AKI9 464 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 AGPSO00116 658 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 S1PR4O95977 384 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 STIP1P31948 543 aaKnown RBP13.3□□□□□ -0.28
PTPRE-203ENST00000442830 GABRA4P48169 554 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 CDKN1CP49918 316 aaPredicted RBP13.3□□□□□ -0.28
PTPRE-203ENST00000442830 SPARCL1Q14515 664 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 NAA25Q14CX7 972 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 TMED2Q15363 201 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 TCTE1Q5JU00 501 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 MRPL14Q6P1L8 145 aaKnown RBP13.3□□□□□ -0.28
PTPRE-203ENST00000442830 TTC23LQ6PF05 361 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 MAMDC2Q7Z304 686 aaPredicted RBP13.3□□□□□ -0.28
PTPRE-203ENST00000442830 PIANPQ8IYJ0 282 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 RAB42Q8N4Z0 105 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 DNAAF3Q8N9W5 541 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 RNF214Q8ND24 703 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 PRR7Q8TB68 274 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 ASZ1Q8WWH4 475 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 C5orf34Q96MH7 638 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 KLHL25Q9H0H3 589 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 FAM60AQ9NP50 221 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 CACNA1DQ01668 2161 aa13.3□□□□□ -0.28
PTPRE-203ENST00000442830 CCL22O00626 93 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 DDX3YO15523 660 aaKnown RBP13.29□□□□□ -0.28
PTPRE-203ENST00000442830 SEMA7AO75326 666 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 ONECUT2O95948 504 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 APOA4P06727 396 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 CBSLP0DN79 551 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 MMP11P24347 488 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 PKLRP30613 574 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 FOXN2P32314 431 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 CBSP35520 551 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 FDFT1P37268 417 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 UNC5DQ6UXZ4 953 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 PEX26Q7Z412 305 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 DCUN1D3Q8IWE4 304 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 SLC22A15Q8IZD6 547 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 DNAJC22Q8N4W6 341 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 ZNF655Q8N720 491 aaPredicted RBP13.29□□□□□ -0.28
PTPRE-203ENST00000442830 FAM71DQ8N9W8 422 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 GSDMBQ8TAX9 411 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 PPP4R1Q8TF05 950 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
PTPRE-203ENST00000442830 RANBP9Q96S59 729 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 ZNF552Q9H707 407 aaPredicted RBP13.29□□□□□ -0.28
PTPRE-203ENST00000442830 ENAMQ9NRM1 1142 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 EURLQ9NYK6 297 aa13.29□□□□□ -0.28
PTPRE-203ENST00000442830 COPG1Q9Y678 874 aaKnown RBP13.29□□□□□ -0.28
PTPRE-203ENST00000442830 ANKUB1A6NFN9 424 aa13.28□□□□□ -0.28
PTPRE-203ENST00000442830 WIPF3A6NGB9 483 aa13.28□□□□□ -0.28
PTPRE-203ENST00000442830 KPNA5O15131 536 aa13.28□□□□□ -0.28
PTPRE-203ENST00000442830 TPH1P17752 444 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms