RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 EFCAB11Q9BUY7 163 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 C1QTNF2Q9BXJ5 285 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 DPY30Q9C005 99 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 MUC13Q9H3R2 512 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 C1orf109Q9NX04 203 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ASIC5Q9NY37 505 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 MOSPD1Q9UJG1 213 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TMED5Q9Y3A6 229 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 FFAR3O14843 346 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 GPR42O15529 346 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PLRG1O43660 514 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 SEC22BO75396 215 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 RSL1D1O76021 490 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 NPPAP01160 153 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PRR35P0CG20 571 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 MYCLP1P12525 358 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 GNAZP19086 355 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 GPX3P22352 226 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CXCR2P25025 360 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 DRD3P35462 400 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CPOXP36551 454 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 NUDT1P36639 197 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 BDKRB1P46663 353 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PREPP48147 710 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 FOXA1P55317 472 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 DLX2Q07687 328 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 TSTA3Q13630 321 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 NFYCQ13952 458 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 WSCD2Q2TBF2 565 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 KHDC1Q4VXA5 237 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 XKR6Q5GH73 641 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 NAIF1Q69YI7 327 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 ZFP1Q6P2D0 407 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 SCIMPQ6UWF3 145 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PDZD3Q86UT5 571 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TRIM74Q86UV6 250 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D19Q8N5T2 526 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 AADATQ8N5Z0 425 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 DNAJB8Q8NHS0 232 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CMTM7Q96FZ5 175 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 MED8Q96G25 268 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 COX14Q96I36 57 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 RSRC1Q96IZ7 334 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 CDRT15Q96T59 188 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 RPP25Q9BUL9 199 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 EFHD1Q9BUP0 239 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PHF7Q9BWX1 381 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 SLC17A9Q9BYT1 436 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TRIT1Q9H3H1 467 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 TNFRSF12AQ9NP84 129 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 SPAG4Q9NPE6 437 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CCDC177Q9NQR7 707 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 STOX2Q9P2F5 926 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 CNOT6Q9ULM6 557 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 ASF1AQ9Y294 204 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PCDHGA11Q9Y5H2 935 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PRR23AA6NEV1 266 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 K7EQS6 105 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PPP6CO00743 305 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TOR1BO14657 336 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 FPGTO14772 594 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 SGTAO43765 313 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 DNAJA2O60884 412 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 EGFP01133 1207 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ZNF8P17098 575 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 GM2AP17900 193 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 IDSP22304 550 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ITPKAP23677 461 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 HTR1BP28222 390 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 AKT2P31751 481 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 POLR2JP52435 117 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 METAP1P53582 386 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ACTR3P61158 418 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 RPL38P63173 70 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 GRB7Q14451 532 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ARHGAP19Q14CB8 494 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 IRF4Q15306 451 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 CPSF6Q16630 551 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS50-205ENST00000441602 C18orf21Q32NC0 220 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 PUS10Q3MIT2 529 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 IL23RQ5VWK5 629 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 FRG2Q64ET8 278 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PAOXQ6QHF9 649 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 RASGRP3Q8IV61 690 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 KRT78Q8N1N4 520 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 PGBD3Q8N328 593 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 OXR1Q8N573 874 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ENDOVQ8N8Q3 282 aaKnown RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 NAT14Q8WUY8 206 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 C3orf30Q96M34 536 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 FRG2BQ96QU4 278 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 SH3GL1Q99961 368 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 TEX101Q9BY14 249 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 BRINP2Q9C0B6 783 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ATG10Q9H0Y0 220 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 UBE2ZQ9H832 354 aaPredicted RBP5.87□□□□□ -1.47
VPS50-205ENST00000441602 RMND5AQ9H871 391 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 SLC7A8Q9UHI5 535 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ZNHIT2Q9UHR6 403 aa5.87□□□□□ -1.47
VPS50-205ENST00000441602 ADGRE2Q9UHX3 823 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms