RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TLR5O60602 858 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 OR7A10O76100 309 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 KRT6AP02538 564 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 KRT6BP04259 564 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 USP17L7P0C7H9 530 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 CYP2A6P11509 494 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-214ENST00000441542 HOXD8P13378 290 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-214ENST00000441542 AKAP5P24588 427 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 CHRNA5P30532 468 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 ADRA1BP35368 520 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 HNF4AP41235 474 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 GABARAPL2P60520 117 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 RPL38P63173 70 aaKnown RBP7.38□□□□□ -1.23
HDAC9-214ENST00000441542 SLC35A2P78381 396 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 STARD3Q14849 445 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 POU4F3Q15319 338 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 TAF1CQ15572 869 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-214ENST00000441542 DDR2Q16832 855 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 CARD16Q5EG05 197 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 TOR2AQ5JU69 321 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 ATPAF2Q8N5M1 289 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 C12orf42Q96LP6 360 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 KIFC1Q9BW19 673 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 ULBP1Q9BZM6 244 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 TKTL2Q9H0I9 626 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 CDCP1Q9H5V8 836 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 CYP3A43Q9HB55 503 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 ENAMQ9NRM1 1142 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 KRT84Q9NSB2 600 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 ABI2Q9NYB9 513 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-214ENST00000441542 OR12D3Q9UGF7 316 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 TMPRSS11EQ9UL52 423 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 TBC1D24Q9ULP9 559 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
HDAC9-214ENST00000441542 SAMHD1Q9Y3Z3 626 aaKnown RBP7.38□□□□□ -1.23
HDAC9-214ENST00000441542 NUP214P35658 2090 aaPredicted RBP7.38□□□□□ -1.23
HDAC9-214ENST00000441542 BTN3A1O00481 513 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 POLR1CO15160 346 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 ERN1O75460 977 aaKnown RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 OR2B3O76000 313 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 RHOBTB1O94844 696 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 LRATO95237 230 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 PRLP01236 227 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 FCER2P06734 321 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 RPS3P23396 243 aaKnown RBP eCLIP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 POU1F1P28069 291 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 HTR1EP28566 365 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 CCR1P32246 355 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 TNFSF8P32971 234 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 TGFBR2P37173 567 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 CCT3P49368 545 aaKnown RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 TKTL1P51854 596 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 DBPQ10586 325 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 TAF12Q16514 161 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 TSTQ16762 297 aaKnown RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 SLC25A52Q3SY17 297 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 FAM174BQ3ZCQ3 159 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 FLYWCH1Q4VC44 716 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 ZC3H12BQ5HYM0 836 aaKnown RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 KLHL17Q6TDP4 642 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 FAM131AQ6UXB0 335 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 C16orf62Q7Z3J2 963 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 VTCN1Q7Z7D3 282 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 SYVN1Q86TM6 617 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 LACC1Q8IV20 430 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 ZDHHC21Q8IVQ6 265 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 NETO1Q8TDF5 533 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 MTERF3Q96E29 417 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 FAM120BQ96EK7 910 aaKnown RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 TRMT61AQ96FX7 289 aaKnown RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 SLC30A2Q9BRI3 323 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 NT5MQ9NPB1 228 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 IL1RAPQ9NPH3 570 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 C8orf4Q9NR00 106 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 ABCB8Q9NUT2 735 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 CD274Q9NZQ7 290 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 ZNF490Q9ULM2 529 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 STAP1Q9ULZ2 295 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 ABCG2Q9UNQ0 655 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 UPK3BL1B0FP48 263 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 HNRNPCL2B2RXH8 293 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 UPK3BL2E5RIL1 263 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 DCLK1O15075 740 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 C1QCP02747 245 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 MYL9P24844 172 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 SOX6P35712 828 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 ARHGDIAP52565 204 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 SMSP52788 366 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 HMGCS1Q01581 520 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 EMX2Q04743 252 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 UAP1L1Q3KQV9 507 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 GPAT3Q53EU6 434 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 SYT6Q5T7P8 510 aaPredicted RBP7.37□□□□□ -1.23
HDAC9-214ENST00000441542 CACHD1Q5VU97 1274 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 ANKS6Q68DC2 871 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 KCTD11Q693B1 232 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 LAX1Q8IWV1 398 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 KRTCAP2Q8N6L1 136 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 SIMC1Q8NDZ2 872 aa7.37□□□□□ -1.23
HDAC9-214ENST00000441542 SETD9Q8NE22 299 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms