RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 ATXN8OSP0DMR3 200 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 RPS3P23396 243 aaKnown RBP eCLIP20.01■□□□□ 0.794e-15■□□□□ 11.3
VIL1-204ENST00000440053 PKLRP30613 574 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 ANKRD20A4Q4UJ75 823 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 CRTC2Q53ET0 693 aaPredicted RBP20.01■□□□□ 0.79
VIL1-204ENST00000440053 CENPUQ71F23 418 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 PRICKLE2Q7Z3G6 844 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 C19orf47Q8N9M1 422 aaKnown RBP20.01■□□□□ 0.79
VIL1-204ENST00000440053 APOBEC4Q8WW27 367 aaKnown RBP20.01■□□□□ 0.79
VIL1-204ENST00000440053 SERPINB12Q96P63 405 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 NAP1L3Q99457 506 aaPredicted RBP20.01■□□□□ 0.79
VIL1-204ENST00000440053 FAM117AQ9C073 453 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 FANCEQ9HB96 536 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 ZNF71Q9NQZ8 489 aaPredicted RBP20.01■□□□□ 0.79
VIL1-204ENST00000440053 LATS2Q9NRM7 1088 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 FARSAQ9Y285 508 aaKnown RBP20.01■□□□□ 0.79
VIL1-204ENST00000440053 KCNMB2Q9Y691 235 aa20.01■□□□□ 0.79
VIL1-204ENST00000440053 SDR42E2A6NKP2 422 aa20■□□□□ 0.79
VIL1-204ENST00000440053 C21orf140B9A014 251 aa20■□□□□ 0.79
VIL1-204ENST00000440053 ZNF749O43361 778 aa20■□□□□ 0.79
VIL1-204ENST00000440053 SLC28A2O43868 658 aa20■□□□□ 0.79
VIL1-204ENST00000440053 KIF5CO60282 957 aa20■□□□□ 0.79
VIL1-204ENST00000440053 PHF2O75151 1096 aa20■□□□□ 0.79
VIL1-204ENST00000440053 SFTPCP11686 197 aa20■□□□□ 0.79
VIL1-204ENST00000440053 CYP2A7P20853 494 aa20■□□□□ 0.79
VIL1-204ENST00000440053 PTPN4P29074 926 aa20■□□□□ 0.79
VIL1-204ENST00000440053 GABRA4P48169 554 aa20■□□□□ 0.79
VIL1-204ENST00000440053 DHX34Q14147 1143 aaKnown RBP20■□□□□ 0.79
VIL1-204ENST00000440053 TYSND1Q2T9J0 566 aa20■□□□□ 0.79
VIL1-204ENST00000440053 PTCHD3Q3KNS1 767 aa20■□□□□ 0.79
VIL1-204ENST00000440053 KIAA0930Q6ICG6 404 aaPredicted RBP20■□□□□ 0.79
VIL1-204ENST00000440053 MRNIPQ6NTE8 343 aa20■□□□□ 0.79
VIL1-204ENST00000440053 NEPROQ6NW34 567 aa20■□□□□ 0.79
VIL1-204ENST00000440053 ZNF517Q6ZMY9 492 aaPredicted RBP20■□□□□ 0.79
VIL1-204ENST00000440053 OTOAQ7RTW8 1153 aa20■□□□□ 0.79
VIL1-204ENST00000440053 DSELQ8IZU8 1212 aa20■□□□□ 0.79
VIL1-204ENST00000440053 NAT8LQ8N9F0 302 aa20■□□□□ 0.79
VIL1-204ENST00000440053 MCUQ8NE86 351 aa20■□□□□ 0.79
VIL1-204ENST00000440053 SKA2Q8WVK7 121 aaPredicted RBP20■□□□□ 0.79
VIL1-204ENST00000440053 PANX3Q96QZ0 392 aa20■□□□□ 0.79
VIL1-204ENST00000440053 ACTR5Q9H9F9 607 aaPredicted RBP20■□□□□ 0.79
VIL1-204ENST00000440053 PCMTD2Q9NV79 361 aa20■□□□□ 0.79
VIL1-204ENST00000440053 A0A0J9YY10 115 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 MAP3K7O43318 606 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 RORAP35398 523 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 BDKRB1P46663 353 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 RAB28P51157 221 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 ITGA1P56199 1179 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 TMED2Q15363 201 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 LRRC6Q86X45 466 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 ZNF669Q96BR6 464 aaPredicted RBP19.99■□□□□ 0.79
VIL1-204ENST00000440053 ABHD17AQ96GS6 310 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 TCTN2Q96GX1 697 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 SIGLEC10Q96LC7 697 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 DDX47Q9H0S4 455 aaKnown RBP19.99■□□□□ 0.79
VIL1-204ENST00000440053 ADNPQ9H2P0 1102 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 SYTL2Q9HCH5 934 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 SAMD15Q9P1V8 674 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 SPTBP11277 2137 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 COL6A6A6NMZ7 2263 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 ZCWPW2A0A1B0GU75 182 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 FAM237BA0A1B0GVD1 139 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 H3BMH7 237 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 K7EM74 188 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 S1PR4O95977 384 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 KLK3P07288 261 aaPredicted RBP19.99■□□□□ 0.79
VIL1-204ENST00000440053 CAPN1P07384 714 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 MSL3P1P0C860 447 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 MLNP12872 115 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 CHRM3P20309 590 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 CD9P21926 228 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 RPS15P62841 145 aaKnown RBP19.99■□□□□ 0.79
VIL1-204ENST00000440053 CTBP1Q13363 440 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 COLEC12Q5KU26 742 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 CNSTQ6PJW8 725 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 UNC5DQ6UXZ4 953 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 CILP2Q8IUL8 1156 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 DCUN1D3Q8IWE4 304 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 DENND6AQ8IWF6 608 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 GPR87Q9BY21 358 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 TRIM4Q9C037 500 aa19.99■□□□□ 0.79
VIL1-204ENST00000440053 MAGEB16A2A368 324 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 E7EQ34 232 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 J3QKU1 62 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 C1orf105O95561 183 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 IL10RAQ13651 578 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 KIR2DS3Q14952 304 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 SLC5A12Q1EHB4 618 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 DNAJC22Q8N4W6 341 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 ENDOVQ8N8Q3 282 aaKnown RBP19.98■□□□□ 0.79
VIL1-204ENST00000440053 GSDMBQ8TAX9 411 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 N4BP2L2Q92802 583 aaPredicted RBP19.98■□□□□ 0.79
VIL1-204ENST00000440053 LRFN5Q96NI6 719 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 TCF12Q99081 682 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 SLC30A3Q99726 388 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 SLC7A5P2Q9GIP4 190 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 XAB2Q9HCS7 855 aaKnown RBP19.98■□□□□ 0.79
VIL1-204ENST00000440053 FBXO6Q9NRD1 293 aaPredicted RBP19.98■□□□□ 0.79
VIL1-204ENST00000440053 SLC39A10Q9ULF5 831 aa19.98■□□□□ 0.79
VIL1-204ENST00000440053 HEMK1Q9Y5R4 338 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms