RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 NFS1Q9Y697 457 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 TTC4O95801 387 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 CYP4F2P78329 520 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 MPP1Q00013 466 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 TAX1BP1Q86VP1 789 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 PDIK1LQ8N165 341 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 OR8K5Q8NH50 307 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 SLC39A7Q92504 469 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 TTC9Q92623 222 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 SNF8Q96H20 258 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 NAT9Q9BTE0 207 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 IARS2Q9NSE4 1012 aaKnown RBP23.23■■□□□ 1.31
CPNE1-217ENST00000439669 FBXO5Q9UKT4 447 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 MRFAP1Q9Y605 127 aa23.23■■□□□ 1.31
CPNE1-217ENST00000439669 ZNF891A8MT65 544 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-217ENST00000439669 TMEM150CB9EJG8 249 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 SMAPO00193 183 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 SCRG1O75711 98 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 MT-ND3P03897 115 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 NTRK1P04629 796 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 CCNYL3P0C7X3 344 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 ATP5DP30049 168 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 ITGA8P53708 1063 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 ETF1P62495 437 aaKnown RBP23.22■■□□□ 1.31
CPNE1-217ENST00000439669 KIR2DS3Q14952 304 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 SPANXN3Q5MJ09 141 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 HP1BP3Q5SSJ5 553 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-217ENST00000439669 HIBCHQ6NVY1 386 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-217ENST00000439669 SYT10Q6XYQ8 523 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 C2orf73Q8N5S3 287 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-217ENST00000439669 C19orf47Q8N9M1 422 aaKnown RBP23.22■■□□□ 1.31
CPNE1-217ENST00000439669 PWWP2AQ96N64 755 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 SYTL2Q9HCH5 934 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 GALPQ9UBC7 116 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 CROTQ9UKG9 612 aa23.22■■□□□ 1.31
CPNE1-217ENST00000439669 A0A0J9YY10 115 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 EFCAB8A8MWE9 144 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 SEC31AO94979 1220 aaKnown RBP23.21■■□□□ 1.31
CPNE1-217ENST00000439669 C1orf105O95561 183 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 ERVK-10P10266 1014 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 CD9P21926 228 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 PEBP1P30086 187 aaKnown RBP23.21■■□□□ 1.31
CPNE1-217ENST00000439669 DLSTP36957 453 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 GRB7Q14451 532 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 HIF1AQ16665 826 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 ACSBG2Q5FVE4 666 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 PCSK4Q6UW60 755 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 RAB42Q8N4Z0 105 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 LMNTD1Q8N9Z9 388 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 FLVCR1-AS1Q8TAF5 88 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 GABPB2Q8TAK5 448 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-217ENST00000439669 N4BP2L2Q92802 583 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-217ENST00000439669 RAD51AP1Q96B01 352 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 CFAP36Q96G28 342 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 SLC45A3Q96JT2 553 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 MENTQ9BUN1 341 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 RAB11FIP5Q9BXF6 653 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 SLC12A9Q9BXP2 914 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 LATS2Q9NRM7 1088 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 IL17BQ9UHF5 180 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 PADI1Q9ULC6 663 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 CHMP2BQ9UQN3 213 aa23.21■■□□□ 1.31
CPNE1-217ENST00000439669 RASGRF2O14827 1237 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 CPNE3O75131 537 aaKnown RBP23.2■■□□□ 1.3
CPNE1-217ENST00000439669 CCNFP41002 786 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 ARL4CP56559 192 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 MRPS25P82663 173 aaKnown RBP23.2■■□□□ 1.3
CPNE1-217ENST00000439669 GBX1Q14549 363 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 SLC5A12Q1EHB4 618 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 TTLL9Q3SXZ7 439 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 CDHR3Q6ZTQ4 885 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 IGDCC3Q8IVU1 814 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 LINC01555Q8NAE3 123 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 LSM14AQ8ND56 463 aaKnown RBP23.2■■□□□ 1.3
CPNE1-217ENST00000439669 OR2L8Q8NGY9 312 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 MAGEC3Q8TD91 643 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 STARD8Q92502 1023 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 NBEAQ8NFP9 2946 aa23.2■■□□□ 1.3
CPNE1-217ENST00000439669 PRKAR1AP10644 381 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 CYP2A7P20853 494 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 ELK3P41970 407 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 CLCN7P51798 805 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 C2orf54Q08AI8 447 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 KLHL38Q2WGJ6 581 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 CCSMST1Q4G0I0 132 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 ZNF549Q6P9A3 640 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 SPATA4Q8NEY3 305 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 OR1L3Q8NH93 324 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 KCNJ9Q92806 393 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 EXTL1Q92935 676 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 SLC22A18Q96BI1 424 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 WBP1Q96G27 269 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 TCTN2Q96GX1 697 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 ARHGAP9Q9BRR9 750 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 PPANQ9NQ55 473 aaKnown RBP23.19■■□□□ 1.3
CPNE1-217ENST00000439669 LHX9Q9NQ69 397 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 ZC3H7BQ9UGR2 993 aaKnown RBP23.19■■□□□ 1.3
CPNE1-217ENST00000439669 SNX24Q9Y343 169 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 COMMD10Q9Y6G5 202 aa23.19■■□□□ 1.3
CPNE1-217ENST00000439669 KRT87PA6NCN2 255 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms