RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 UBXN11Q5T124 520 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 ANKS6Q68DC2 871 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 ALKAL1Q6UXT8 129 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 FNDC5Q8NAU1 212 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 C3orf58Q8NDZ4 430 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 SLC22A17Q8WUG5 538 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 SKA2Q8WVK7 121 aaPredicted RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 DPF3Q92784 378 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 RIT1Q92963 219 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 C1QTNF1Q9BXJ1 281 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 CLEC4MQ9H2X3 399 aaPredicted RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 MCCC2Q9HCC0 563 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 DYRK4Q9NR20 520 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 PPP6CO00743 305 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 TBX18O95935 607 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 TNNI3P19429 210 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 PRKACGP22612 351 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 CD52P31358 61 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 METTL2BQ6P1Q9 378 aaKnown RBP15.48■□□□□ 0.07
DHFR-201ENST00000439211 GLRX5Q86SX6 157 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 ADAMTSL2Q86TH1 951 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 FAM9CQ8IZT9 166 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 EID3Q8N140 333 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 C2CD4AQ8NCU7 369 aaPredicted RBP15.48■□□□□ 0.07
DHFR-201ENST00000439211 SETD9Q8NE22 299 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 MRGPRX2Q96LB1 330 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 SERPINB11Q96P15 392 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 WASH6PQ9NQA3 447 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 MKLN1Q9UL63 735 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 GRIP1Q9Y3R0 1128 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 MAFKO60675 156 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 KATNA1O75449 491 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 F2P00734 622 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 SBK3P0C264 359 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 MAGEA12P43365 314 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 GSK3BP49841 420 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 ETV1P50549 477 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 HSPA14Q0VDF9 509 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 SMYD5Q6GMV2 418 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 CCDC149Q6ZUS6 474 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 UBQLNLQ8IYU4 475 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 AASSQ9UDR5 926 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 WDR81Q562E7 1941 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 FSHRP23945 695 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 DMC1Q14565 340 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 GPAT3Q53EU6 434 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 TECRLQ5HYJ1 363 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 TBPL2Q6SJ96 375 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 SPRED1Q7Z699 444 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 MFSD6LQ8IWD5 586 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 SLC22A15Q8IZD6 547 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 CHDHQ8NE62 594 aaPredicted RBP15.48■□□□□ 0.07
DHFR-201ENST00000439211 ROPN1LQ96C74 230 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 ADAM2Q99965 735 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 COPS4Q9BT78 406 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 SLC25A51Q9H1U9 297 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 PRDM8Q9NQV8 689 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 ARL5AQ9Y689 179 aa15.48■□□□□ 0.07
DHFR-201ENST00000439211 HMX3A6NHT5 357 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 CD3EAPO15446 510 aaKnown RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 LZTS3O60299 673 aaPredicted RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 RPS3P23396 243 aaKnown RBP eCLIP15.47■□□□□ 0.073e-32■■■□□ 17.4
DHFR-201ENST00000439211 ARSDP51689 593 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 SLAMF1Q13291 335 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 SNTA1Q13424 505 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 CCL14Q16627 93 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 USP50Q70EL3 339 aaPredicted RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 CFAP52Q8N1V2 620 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 FAM162AQ96A26 154 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 NSUN5Q96P11 429 aaKnown RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 RERGLQ9H628 205 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 COMMD8Q9NX08 183 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 DDOSTP39656 456 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 SCRN3Q0VDG4 424 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 RASAL3Q86YV0 1011 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 TIGD4Q8IY51 512 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 CDYL2Q8N8U2 506 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 RTL3Q8N8U3 475 aaKnown RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 OR13C4Q8NGS5 318 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 FBXO32Q969P5 355 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 RIPOR3Q96MK2 946 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 NEDD4LQ96PU5 975 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 EGFL8Q99944 293 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 THUMPD3Q9BV44 507 aaKnown RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 CDADC1Q9BWV3 514 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 OSBPL2Q9H1P3 480 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 FAM118AQ9NWS6 357 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 MARCH4Q9P2E8 410 aaPredicted RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 POLR2AP24928 1970 aaKnown RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 DNAJB5O75953 348 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 PDE9AO76083 593 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 MT-ND2P03891 347 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 CLEC2LP0C7M8 214 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 GJA5P36382 358 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 MRPS6P82932 125 aaKnown RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 LAPTM5Q13571 262 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 LRRC26Q2I0M4 334 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 TYW3Q6IPR3 259 aaKnown RBP15.47■□□□□ 0.07
DHFR-201ENST00000439211 FAM45BPQ6NSW5 357 aa15.47■□□□□ 0.07
DHFR-201ENST00000439211 LINC00299Q6ZSB3 139 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms