RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PRMT5O14744 637 aaPredicted RBP17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 CD3EAPO15446 510 aaKnown RBP17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 ZSCAN9O15535 394 aaPredicted RBP17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 PDGFAP04085 211 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 CCDC175P0C221 793 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 RAB28P51157 221 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 MLLT10P55197 1068 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 SEMA3AQ14563 771 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 C1orf189Q5VU69 101 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 MLIPQ5VWP3 458 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 TTC23LQ6PF05 361 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 UNC5DQ6UXZ4 953 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 LDB1Q86U70 411 aaPredicted RBP17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 DCUN1D3Q8IWE4 304 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 EFCAB3Q8N7B9 438 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 ADAMTS17Q8TE56 1095 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 SKA2Q8WVK7 121 aaPredicted RBP17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 SLC22A18Q96BI1 424 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 PANX3Q96QZ0 392 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 IL22Q9GZX6 179 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 CHRNA10Q9GZZ6 450 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 BFARQ9NZS9 450 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 NDOR1Q9UHB4 597 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 GNPTGQ9UJJ9 305 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 SLC39A10Q9ULF5 831 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 SRPK3Q9UPE1 567 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 ZKSCAN5Q9Y2L8 839 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 ZNF451Q9Y4E5 1061 aa17.8■□□□□ 0.44
AC004540.1-201ENST00000439120 TNRC6AQ8NDV7 1962 aaKnown RBP17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 TTLL8A6PVC2 850 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 NDUFS3O75489 264 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 FGGP02679 453 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 CAPN1P07384 714 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 CD63P08962 238 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 TPBGLP0DKB5 382 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 PKLRP30613 574 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 OTX2P32243 289 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 CRADDP78560 199 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 ZIC1Q15915 447 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 RHBDD2Q6NTF9 364 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 TLDC1Q6P9B6 456 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 DRICH1Q6PGQ1 229 aaPredicted RBP17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 MED25Q71SY5 747 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 KRT222Q8N1A0 295 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 ZNF655Q8N720 491 aaPredicted RBP17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 TMEM102Q8N9M5 508 aaPredicted RBP17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 PROKR1Q8TCW9 393 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 NDC1Q9BTX1 674 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 SPRTNQ9H040 489 aaPredicted RBP17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 IFT80Q9P2H3 777 aaPredicted RBP17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 PLCL2Q9UPR0 1127 aa17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 DRG1Q9Y295 367 aaKnown RBP17.79■□□□□ 0.44
AC004540.1-201ENST00000439120 A6NL46 340 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 KPNA5O15131 536 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 ZNF185O15231 689 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 CBSLP0DN79 551 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 AOAHP28039 575 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 CBSP35520 551 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 FOLR3P41439 243 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 NPY2RP49146 381 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 DCDP81605 110 aaKnown RBP17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 SIX1Q15475 284 aaPredicted RBP17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 KYNUQ16719 465 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 VRK3Q8IV63 474 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 MPP5Q8N3R9 675 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 RAB42Q8N4Z0 105 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 FLVCR1-AS1Q8TAF5 88 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 LKAAEAR1Q8TD35 194 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 MIB2Q96AX9 1013 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 INTS7Q9NVH2 962 aaKnown RBP17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 MARCH4Q9P2E8 410 aaPredicted RBP17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 CIDEBQ9UHD4 219 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 CDYLQ9Y232 598 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 PTRH2Q9Y3E5 179 aaKnown RBP17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 PCDHGB7Q9Y5F8 929 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 MRFAP1Q9Y605 127 aa17.78■□□□□ 0.44
AC004540.1-201ENST00000439120 PFDN6O15212 129 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 HCRTR1O43613 425 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 CEP104O60308 925 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 GPC4O75487 556 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 MAGP20916 626 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 CD9P21926 228 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 PEBP1P30086 187 aaKnown RBP17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 ATP1A4Q13733 1029 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 UBAP2LQ14157 1087 aaKnown RBP17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 SLC9A5Q14940 896 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 ZNF385CQ66K41 422 aaPredicted RBP17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 OTOAQ7RTW8 1153 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 TAX1BP1Q86VP1 789 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 LRRC6Q86X45 466 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 C2orf73Q8N5S3 287 aaPredicted RBP17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 ZBTB2Q8N680 514 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 TRIM58Q8NG06 486 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 DLG3Q92796 817 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 IP6K3Q96PC2 410 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 RAB11FIP5Q9BXF6 653 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 HOMER3Q9NSC5 361 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 GPR83Q9NYM4 423 aa17.77■□□□□ 0.44
AC004540.1-201ENST00000439120 DHCR7Q9UBM7 475 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms