RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CCM2LQ9NUG4 571 aaPredicted RBP13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 A0A1W2PPW3 197 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 EEDO75530 441 aaKnown RBP13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 LHCGRP22888 699 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 NNMTP40261 264 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 LIPEQ05469 1076 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 BNIP2Q12982 314 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 PCBP2Q15366 365 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 CYP51A1Q16850 503 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 SLC44A4Q53GD3 710 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 TPRG1Q6ZUI0 275 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 ERMP1Q7Z2K6 904 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 GPR141Q7Z602 305 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 GPR149Q86SP6 731 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 ZNF366Q8N895 744 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 ZUFSPQ96AP4 578 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 MRPL38Q96DV4 380 aaKnown RBP13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 PDLIM5Q96HC4 596 aaKnown RBP13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 MCCC1Q96RQ3 725 aaPredicted RBP13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 TRIM15Q9C019 465 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 PLGRKTQ9HBL7 147 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 LATS2Q9NRM7 1088 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 SMOXQ9NWM0 555 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 ACTR3BQ9P1U1 418 aa13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 POLR3HQ9Y535 204 aaPredicted RBP13.58□□□□□ -0.24
PTCHD3-201ENST00000438700 DOCK8Q8NF50 2099 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 WASH3PC4AMC7 463 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 TAPBPO15533 448 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 NFATC1O95644 943 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 MT-ND1P03886 318 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 HMOX2P30519 316 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 RGS4P49798 205 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 TRAF3Q13114 568 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 INPP5AQ14642 412 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 RFTN2Q52LD8 501 aaPredicted RBP13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 PDCD4Q53EL6 469 aaKnown RBP13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 COQ5Q5HYK3 327 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 FGD3Q5JSP0 725 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 LCN8Q6JVE9 175 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 ETFBKMTQ8IXQ9 262 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 KIAA1958Q8N8K9 716 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 HEPHQ9BQS7 1158 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 SOX17Q9H6I2 414 aaPredicted RBP13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 BRD9Q9H8M2 597 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 ARMC1Q9NVT9 282 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 WWOXQ9NZC7 414 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 LEF1Q9UJU2 399 aaPredicted RBP13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 PPIL1Q9Y3C6 166 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 TNPO3Q9Y5L0 923 aaKnown RBP13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 AQP12BA6NM10 295 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 LSM1O15116 133 aaKnown RBP13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 LEFTY1O75610 366 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 FCARP24071 287 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 SPAM1P38567 509 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 SLC6A11P48066 632 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 DGKQP52824 942 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 FOXM1Q08050 763 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 PRKG2Q13237 762 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 PMS2P3Q13401 168 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 AP5B1Q2VPB7 878 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 GPR107Q5VW38 600 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 NANOGP8Q6NSW7 305 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 DHRS4L2Q6PKH6 230 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 MILR1Q7Z6M3 343 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 AQP12AQ8IXF9 295 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 CBR4Q8N4T8 237 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 ZBTB2Q8N680 514 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 GPR26Q8NDV2 337 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 WFIKKN2Q8TEU8 576 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 TFAP2CQ92754 450 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 GDF15Q99988 308 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 FAM126AQ9BYI3 521 aaPredicted RBP13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 ANKRD60Q9BZ19 345 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 NANOGQ9H9S0 305 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 GDE1Q9NZC3 331 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 B4GALT6Q9UBX8 382 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 ANGPTL3Q9Y5C1 460 aa13.57□□□□□ -0.24
PTCHD3-201ENST00000438700 FAM234BA2RU67 622 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 RSL1D1O76021 490 aaKnown RBP13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 OTCP00480 354 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 DGKAP23743 735 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 YAP1P46937 504 aaKnown RBP13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 CD97P48960 835 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 HYAL1Q12794 435 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 GAB4Q2WGN9 574 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 SGO1Q5FBB7 561 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 ARSIQ5FYB1 569 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 GRAMD4Q6IC98 578 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 SYCE2Q6PIF2 218 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 CYP20A1Q6UW02 462 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 RFLNAQ6ZTI6 216 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 RALGPS2Q86X27 583 aaPredicted RBP13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 ADGRG5Q8IZF4 528 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 OFCC1Q8IZS5 231 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 PDPRQ8NCN5 879 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms