RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 HECAQ9UBI9 543 aaPredicted RBP16.36■□□□□ 0.21
TTC3-209ENST00000438055 AASSQ9UDR5 926 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 PCDHB14Q9Y5E9 798 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 H7C0S8 307 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 PDYNP01213 254 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 NKG7Q16617 165 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 SLC8B1Q6J4K2 584 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 CES5AQ6NT32 575 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 RFLNAQ6ZTI6 216 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 NXPE1Q8N323 547 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 TERB1Q8NA31 727 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 PDPRQ8NCN5 879 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 INPP5KQ9BT40 448 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 FAM118AQ9NWS6 357 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 PTPRDP23468 1912 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 SCN4AP35499 1836 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 MYO7AQ13402 2215 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 hCG_2039718K7EN88 272 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 XPNPEP2O43895 674 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 SCELO95171 688 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 PON2Q15165 354 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 OR4F3Q6IEY1 312 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 RNF175Q8N4F7 328 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 ARL10Q8N8L6 244 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 DCAF4L2Q8NA75 395 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 PAPD5Q8NDF8 572 aaKnown RBP16.36■□□□□ 0.21
TTC3-209ENST00000438055 SLC22A17Q8WUG5 538 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 EGLN2Q96KS0 407 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 RUBCNLQ9H714 662 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 KCTD5Q9NXV2 234 aa16.36■□□□□ 0.21
TTC3-209ENST00000438055 NLRC5Q86WI3 1866 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
TTC3-209ENST00000438055 AOC2O75106 756 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 INHAP05111 366 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 PIGAP37287 484 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 POM121L1PQ3SYA9 428 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 LRRC66Q68CR7 880 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 HORMAD1Q86X24 394 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 SYT12Q8IV01 421 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 GLB1L3Q8NCI6 653 aaPredicted RBP16.35■□□□□ 0.21
TTC3-209ENST00000438055 ZNF548Q8NEK5 533 aaPredicted RBP16.35■□□□□ 0.21
TTC3-209ENST00000438055 NETO1Q8TDF5 533 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 MRPS31Q92665 395 aaKnown RBP16.35■□□□□ 0.21
TTC3-209ENST00000438055 PANX1Q96RD7 426 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 LHPPQ9H008 270 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 ELAC1Q9H777 363 aaKnown RBP16.35■□□□□ 0.21
TTC3-209ENST00000438055 SRRDQ9UH36 339 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 SLC22A14Q9Y267 594 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 TET1Q8NFU7 2136 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 RECQL5O94762 991 aaPredicted RBP16.35■□□□□ 0.21
TTC3-209ENST00000438055 NTRK1P04629 796 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 TACR1P25103 407 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 ALDH4A1P30038 563 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 EMP3P54852 163 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 ITGADQ13349 1161 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 FNDC8Q8TC99 324 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 TPD52L3Q96J77 140 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 SMG9Q9H0W8 520 aaKnown RBP16.35■□□□□ 0.21
TTC3-209ENST00000438055 PCDH12Q9NPG4 1184 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 SLC25A37Q9NYZ2 338 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 VPS4AQ9UN37 437 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 SNX6Q9UNH7 406 aa16.35■□□□□ 0.21
TTC3-209ENST00000438055 NPIPB15A6NHN6 443 aaPredicted RBP16.34■□□□□ 0.21
TTC3-209ENST00000438055 XYLBO75191 536 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 URODP06132 367 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 OR56A5P0C7T3 313 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 EBLN1P0CF75 366 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 AQP1P29972 269 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 PTCHD3Q3KNS1 767 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 PRR23BQ6ZRT6 265 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 RIMKLAQ8IXN7 391 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 ALDH16A1Q8IZ83 802 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 ATG16L2Q8NAA4 619 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 GPR26Q8NDV2 337 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 SNX19Q92543 992 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 MED8Q96G25 268 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 PDLIM5Q96HC4 596 aaKnown RBP16.34■□□□□ 0.21
TTC3-209ENST00000438055 SLC6A13Q9NSD5 602 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 CLEC4EQ9ULY5 219 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 TOR1BO14657 336 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 PER2O15055 1255 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 MITFO75030 526 aaPredicted RBP16.34■□□□□ 0.21
TTC3-209ENST00000438055 NSG1P42857 185 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 OCA2Q04671 838 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 CD47Q08722 323 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 ATP13A5Q4VNC0 1218 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 C6orf141Q5SZD1 244 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 CRTC3Q6UUV7 619 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 ZDHHC21Q8IVQ6 265 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 CNIH3Q8TBE1 160 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 RAD21L1Q9H4I0 556 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 ANKRD28O15084 1053 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 ABCB7O75027 752 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 IRF8Q02556 426 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 NR1D2Q14995 579 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.34■□□□□ 0.214e-10■■■■■ 31.1
TTC3-209ENST00000438055 CMTM8Q8IZV2 173 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 TMCO5AQ8N6Q1 288 aa16.34■□□□□ 0.21
TTC3-209ENST00000438055 ZNF420Q8TAQ5 688 aaPredicted RBP16.34■□□□□ 0.21
TTC3-209ENST00000438055 BORCS5Q969J3 196 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms