RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SNX29P2Q8IUI4 249 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 PHYKPLQ8IUZ5 450 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 NXPE1Q8N323 547 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 C2orf15Q8WU43 125 aaKnown RBP15.22■□□□□ 0.03
SCARF1-203ENST00000434376 FAM162AQ96A26 154 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 COX4I2Q96KJ9 171 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 TCF12Q99081 682 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 SDR39U1Q9NRG7 319 aaPredicted RBP15.22■□□□□ 0.03
SCARF1-203ENST00000434376 PKD2L2Q9NZM6 624 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 TMEM181Q9P2C4 612 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 DLGAP4Q9Y2H0 992 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 SNAP29O95721 258 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 NFKB2Q00653 900 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 CTBSQ01459 385 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 NAE1Q13564 534 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 CARTPTQ16568 116 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 TPGS2Q68CL5 300 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 GALNT18Q6P9A2 607 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 PLEKHA8Q96JA3 519 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 ADI1Q9BV57 179 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 CCDC90BQ9GZT6 254 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 ING2Q9H160 280 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 SLC6A13Q9NSD5 602 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 SLC25A13Q9UJS0 675 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 VPS9D1Q9Y2B5 631 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 A0A1W2PP18 115 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 GAPDHSO14556 408 aaPredicted RBP15.22■□□□□ 0.03
SCARF1-203ENST00000434376 BDKRB1P46663 353 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 ERVK-8P63133 956 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 PTSQ03393 145 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 SPIDRQ14159 915 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 HERC3Q15034 1050 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 SYTL3Q4VX76 610 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 MPPE1Q53F39 396 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 SUSD1Q6UWL2 747 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 USP45Q70EL2 814 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 GALNT5Q7Z7M9 940 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 TRAPPC5Q8IUR0 188 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 CROCCP3Q8IVE0 287 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 CENPSQ8N2Z9 138 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 POF1BQ8WVV4 589 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 ZBTB18Q99592 522 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 GPATCH1Q9BRR8 931 aaKnown RBP15.22■□□□□ 0.03
SCARF1-203ENST00000434376 CHID1Q9BWS9 393 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 SMURF2Q9HAU4 748 aa15.22■□□□□ 0.03
SCARF1-203ENST00000434376 CHD5Q8TDI0 1954 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 TLL1O43897 1013 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 COQ9O75208 318 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 ELMSAN1Q6PJG2 1045 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 ZNF621Q6ZSS3 439 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 KCTD8Q6ZWB6 473 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 HSD11B1LQ7Z5J1 315 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 SLC44A2Q8IWA5 706 aaPredicted RBP15.21■□□□□ 0.03
SCARF1-203ENST00000434376 ALG14Q96F25 216 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 ZNF597Q96LX8 424 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 AIG1Q9NVV5 245 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 PLAGL1Q9UM63 463 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 TOR1BO14657 336 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 LATO43561 262 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 OTCP00480 354 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 PABPC1P11940 636 aaKnown RBP15.21■□□□□ 0.03
SCARF1-203ENST00000434376 ACRV1P26436 265 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 UAP1L1Q3KQV9 507 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 SPESP1Q6UW49 350 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 ENPP6Q6UWR7 440 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 SZRD1Q7Z422 152 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 GPR180Q86V85 440 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 CARM1Q86X55 608 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 ZC3H7AQ8IWR0 971 aaKnown RBP15.21■□□□□ 0.03
SCARF1-203ENST00000434376 SUCOQ9UBS9 1254 aaKnown RBP15.21■□□□□ 0.03
SCARF1-203ENST00000434376 LEF1Q9UJU2 399 aaPredicted RBP15.21■□□□□ 0.03
SCARF1-203ENST00000434376 OR51B4Q9Y5P0 310 aa15.21■□□□□ 0.03
SCARF1-203ENST00000434376 RHOP08100 348 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 HSPA1AP0DMV8 641 aaKnown RBP15.2■□□□□ 0.02
SCARF1-203ENST00000434376 HSPA1BP0DMV9 641 aaKnown RBP15.2■□□□□ 0.02
SCARF1-203ENST00000434376 AP1S1P61966 158 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 RFTN1Q14699 578 aaPredicted RBP15.2■□□□□ 0.02
SCARF1-203ENST00000434376 TRIM16LQ309B1 348 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 SYTL1Q8IYJ3 562 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 TMCO5AQ8N6Q1 288 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 ITFG1Q8TB96 612 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 BIRC7Q96CA5 298 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 INPP5KQ9BT40 448 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 DGCR6LQ9BY27 220 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 INIPQ9NRY2 104 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 INVSQ9Y283 1065 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 PTGES3LE9PB15 166 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 WISP3O95389 354 aaPredicted RBP15.2■□□□□ 0.02
SCARF1-203ENST00000434376 PDYNP01213 254 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 ANXA5P08758 320 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 LAG3P18627 525 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 PDHA2P29803 388 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 RELAQ04206 551 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 RAB39AQ14964 217 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 MAPK11Q15759 364 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 CYP2A13Q16696 494 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 TBPL2Q6SJ96 375 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 VWCEQ96DN2 955 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 P2RY13Q9BPV8 354 aa15.2■□□□□ 0.02
SCARF1-203ENST00000434376 DPH2Q9BQC3 489 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms