RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 PEX13Q92968 403 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 SGSM3Q96HU1 749 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 PANX3Q96QZ0 392 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 IL22Q9GZX6 179 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 EIF2B3Q9NR50 452 aaKnown RBP12.86□□□□□ -0.35
EDEM1-202ENST00000434243 TXLNGQ9NUQ3 528 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 MARCH4Q9P2E8 410 aaPredicted RBP12.86□□□□□ -0.35
EDEM1-202ENST00000434243 GPN3Q9UHW5 284 aaPredicted RBP12.86□□□□□ -0.35
EDEM1-202ENST00000434243 SLC39A10Q9ULF5 831 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 TTC7AQ9ULT0 858 aaPredicted RBP12.86□□□□□ -0.35
EDEM1-202ENST00000434243 PADI2Q9Y2J8 665 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 ZKSCAN5Q9Y2L8 839 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 KLHL20Q9Y2M5 609 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 AP1M2Q9Y6Q5 423 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 A6NL46 340 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 ZNF185O15231 689 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 HCRTR1O43613 425 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 NRDCO43847 1150 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 TMEM63AO94886 807 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 PDGFAP04085 211 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 CBSLP0DN79 551 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 MGAT1P26572 445 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 AOAHP28039 575 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 PKLRP30613 574 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 OTX2P32243 289 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 CBSP35520 551 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 VPS41P49754 854 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 RAB28P51157 221 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 MLLT10P55197 1068 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 FOXK1P85037 733 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 NCF4Q15080 339 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 SLC5A12Q1EHB4 618 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 FAM198BQ6UWH4 519 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 ZNF655Q8N720 491 aaPredicted RBP12.85□□□□□ -0.35
EDEM1-202ENST00000434243 TRIM58Q8NG06 486 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 IL17FQ96PD4 163 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 DPH2Q9BQC3 489 aaPredicted RBP12.85□□□□□ -0.35
EDEM1-202ENST00000434243 NDOR1Q9UHB4 597 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 GNPTGQ9UJJ9 305 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 TSR3Q9UJK0 312 aaKnown RBP12.85□□□□□ -0.35
EDEM1-202ENST00000434243 G3BP2Q9UN86 482 aaKnown RBP12.85□□□□□ -0.35
EDEM1-202ENST00000434243 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
EDEM1-202ENST00000434243 TTLL8A6PVC2 850 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 GOLGA8KD6RF30 607 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 GOLGA8TH3BQL2 631 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 ZSCAN9O15535 394 aaPredicted RBP12.84□□□□□ -0.35
EDEM1-202ENST00000434243 GPC4O75487 556 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 VAPBO95292 243 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 CAPN1P07384 714 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 MAGP20916 626 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 CD9P21926 228 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 ALAS2P22557 587 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 PEBP1P30086 187 aaKnown RBP12.84□□□□□ -0.35
EDEM1-202ENST00000434243 EIF3BP55884 814 aaKnown RBP12.84□□□□□ -0.35
EDEM1-202ENST00000434243 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
EDEM1-202ENST00000434243 SLC9A5Q14940 896 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 SF1Q15637 639 aaKnown RBP12.84□□□□□ -0.35
EDEM1-202ENST00000434243 KYNUQ16719 465 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 LRRC8BQ6P9F7 803 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 UNC5DQ6UXZ4 953 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 ZNF662Q6ZS27 426 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 OTOAQ7RTW8 1153 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 SDCCAG8Q86SQ7 713 aaPredicted RBP12.84□□□□□ -0.35
EDEM1-202ENST00000434243 RAB43Q86YS6 212 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 DCUN1D3Q8IWE4 304 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 FLVCR1-AS1Q8TAF5 88 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 SLC22A18Q96BI1 424 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 MFSD3Q96ES6 412 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 C17orf62Q9BQA9 187 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 NDC1Q9BTX1 674 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 HOMER3Q9NSC5 361 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 TREX1Q9NSU2 369 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 SYBUQ9NX95 663 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 IFT80Q9P2H3 777 aaPredicted RBP12.84□□□□□ -0.35
EDEM1-202ENST00000434243 DHCR7Q9UBM7 475 aaKnown RBP12.84□□□□□ -0.35
EDEM1-202ENST00000434243 PLCL2Q9UPR0 1127 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 CDYLQ9Y232 598 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 KALRNO60229 2985 aa12.84□□□□□ -0.35
EDEM1-202ENST00000434243 PIEZO2Q9H5I5 2752 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 KPNA5O15131 536 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 PFDN6O15212 129 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 CTSBP07858 339 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 FMO4P31512 558 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 RRADP55042 308 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 SARNPP82979 210 aaKnown RBP12.83□□□□□ -0.36
EDEM1-202ENST00000434243 GPS1Q13098 491 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 MRNIPQ6NTE8 343 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 RHBDD2Q6NTF9 364 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 CASC4Q6P4E1 433 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 TLDC1Q6P9B6 456 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 ATCAYQ86WG3 371 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 LRRC6Q86X45 466 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 MPP5Q8N3R9 675 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 DNAJC22Q8N4W6 341 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 RAB42Q8N4Z0 105 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 ZBTB2Q8N680 514 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 LINC01555Q8NAE3 123 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 ADAMTS17Q8TE56 1095 aa12.83□□□□□ -0.36
EDEM1-202ENST00000434243 FAM136AQ96C01 138 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms