RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 CDH1P12830 882 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 DDX6P26196 483 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■■■ 35.4
SENP3-202ENST00000429205 STARP49675 285 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 CSRP3P50461 194 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TRAF2Q12933 501 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 CHI3L2Q15782 390 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 HSF5Q4G112 596 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 ARHGAP15Q53QZ3 475 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 CLEC14AQ86T13 490 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 JAZF1Q86VZ6 243 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 SLC41A1Q8IVJ1 513 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 LPCAT1Q8NF37 534 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TSPAN14Q8NG11 270 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 OR13C4Q8NGS5 318 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 VANGL1Q8TAA9 524 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 FIBINQ8TAL6 211 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 PDCD6IPQ8WUM4 868 aaKnown RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 S100ZQ8WXG8 99 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TBATAQ96M53 351 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TMEM68Q96MH6 324 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 ZSWIM3Q96MP5 696 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 DEPDC7Q96QD5 511 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 PKD2L2Q9NZM6 624 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 INTS6Q9UL03 887 aaKnown RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 MN1Q10571 1320 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 FAM95CA0A1B0GW59 222 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 KLF11O14901 512 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 SLC7A4O43246 635 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 XYLBO75191 536 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 PROCP04070 461 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 HNRNPA1P09651 372 aaKnown RBP eCLIP13.2□□□□□ -0.3
SENP3-202ENST00000429205 MAOBP27338 520 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 DCKP27707 260 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 PBX2P40425 430 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 BNC1Q01954 994 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 ITGADQ13349 1161 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 GPM6BQ13491 265 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TLR1Q15399 786 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 PRSS36Q5K4E3 855 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 NCEH1Q6PIU2 408 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 CNSTQ6PJW8 725 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 ADGRD2Q7Z7M1 963 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 LDB1Q86U70 411 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 IGFN1Q86VF2 1251 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TMEM25Q86YD3 366 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 ST13P5Q8NFI4 369 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 MCOLN3Q8TDD5 553 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 PYDC1Q8WXC3 89 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 ING5Q8WYH8 240 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 E2F7Q96AV8 911 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 ZNF707Q96C28 371 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 SLC2A11Q9BYW1 496 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TM6SF2Q9BZW4 377 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 MFSD1Q9H3U5 465 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 TRIM45Q9H8W5 580 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 MARCH4Q9P2E8 410 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 TAGLN3Q9UI15 199 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 ADAMTS6Q9UKP5 1117 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 YBX2Q9Y2T7 364 aaKnown RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 CAB39Q9Y376 341 aaPredicted RBP13.2□□□□□ -0.3
SENP3-202ENST00000429205 TRAF6Q9Y4K3 522 aa13.2□□□□□ -0.3
SENP3-202ENST00000429205 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
SENP3-202ENST00000429205 CYBBP04839 570 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 KRT8P05787 483 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 ATP5BP06576 529 aaKnown RBP13.19□□□□□ -0.3
SENP3-202ENST00000429205 PEX2P28328 305 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 ACVR1Q04771 509 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 BST1Q10588 318 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 ZNF460Q14592 562 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 CBX2Q14781 532 aaPredicted RBP13.19□□□□□ -0.3
SENP3-202ENST00000429205 PTPRRQ15256 657 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 FASTKD1Q53R41 847 aaKnown RBP13.19□□□□□ -0.3
SENP3-202ENST00000429205 RETSATQ6NUM9 610 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 CYP20A1Q6UW02 462 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 ZCCHC23Q6ZST2 131 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 KIAA0408Q6ZU52 694 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 CILP2Q8IUL8 1156 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 CEP97Q8IW35 865 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 MDGA1Q8NFP4 955 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 OR6C4Q8NGE1 309 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 OR6K2Q8NGY2 324 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 MYDGFQ969H8 173 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
SENP3-202ENST00000429205 CNDP1Q96KN2 507 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 EFHD1Q9BUP0 239 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 C1orf21Q9H246 121 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 ZNF395Q9H8N7 513 aaPredicted RBP13.19□□□□□ -0.3
SENP3-202ENST00000429205 PRDM8Q9NQV8 689 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 BCAP29Q9UHQ4 241 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 CNOT11Q9UKZ1 510 aaKnown RBP13.19□□□□□ -0.3
SENP3-202ENST00000429205 DTNAQ9Y4J8 743 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 TRANK1O15050 2925 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 PRRC2BQ5JSZ5 2229 aaKnown RBP13.19□□□□□ -0.3
SENP3-202ENST00000429205 ERVH48-1M5A8F1 160 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 PRMT3O60678 531 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 CCNDBP1O95273 360 aa13.19□□□□□ -0.3
SENP3-202ENST00000429205 PIGNO95427 931 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms