RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ARL4CP56559 192 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 HSPA14Q0VDF9 509 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 SP140Q13342 867 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 THOC5Q13769 683 aaKnown RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 CRYMQ14894 314 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 TRIP13Q15645 432 aaPredicted RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 HIF1AQ16665 826 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 TUSC1Q2TAM9 212 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 MANEAQ5SRI9 462 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 ANKS6Q68DC2 871 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 IRGCQ6NXR0 463 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 CASC4Q6P4E1 433 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 CEP128Q6ZU80 1094 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 SLC26A11Q86WA9 606 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF761Q86XN6 746 aaPredicted RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 FAM129CQ86XR2 697 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 LILRA3Q8N6C8 439 aaPredicted RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 SPATA4Q8NEY3 305 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 OR2L8Q8NGY9 312 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF501Q96CX3 271 aaPredicted RBP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 MAP3K3Q99759 626 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 ERP44Q9BS26 406 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 ZMYND15Q9H091 742 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 TSPYL1Q9H0U9 437 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 CCDC68Q9H2F9 335 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 ADNPQ9H2P0 1102 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 FGF21Q9NSA1 209 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 FBXO5Q9UKT4 447 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 DHRS7Q9Y394 339 aa8.85□□□□□ -0.99
SMC1A-203ENST00000428014 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMC1A-203ENST00000428014 A0A0J9YY10 115 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CCDC189A1A4V9 331 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF891A8MT65 544 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 GFYI3L273 518 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 MYO1CO00159 1063 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 BTN3A3O00478 584 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 BTN3A1O00481 513 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 SLC16A5O15375 505 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 EFSO43281 561 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 PRICKLE3O43900 615 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 SRPX2O60687 465 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CPNE3O75131 537 aaKnown RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 AVILO75366 819 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 SPAG6O75602 509 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 KRT37O76014 449 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 C1orf105O95561 183 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CHRM5P08912 532 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 RAB40ALP0C0E4 278 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 PRSS56P0CW18 603 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 HRH2P25021 359 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ITPKBP27987 946 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ARL4DP49703 201 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 VPS41P49754 854 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CLCN7P51798 805 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CRADDP78560 199 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CKAP4Q07065 602 aaKnown RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 TUBB3Q13509 450 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 GRB7Q14451 532 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CYP2A13Q16696 494 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CTSL3PQ5NE16 218 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 IZUMO3Q5VZ72 239 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF470Q6ECI4 717 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 TLDC1Q6P9B6 456 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 UNC5AQ6ZN44 842 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 KCNMB4Q86W47 210 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 CACNA2D3Q8IZS8 1091 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 TAB3Q8N5C8 712 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 LMNTD1Q8N9Z9 388 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 OR4E2Q8NGC2 313 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 FLVCR1-AS1Q8TAF5 88 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 PROKR1Q8TCW9 393 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 HNRNPLLQ8WVV9 542 aaKnown RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 TTC9Q92623 222 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 INPP5DQ92835 1189 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF669Q96BR6 464 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 PDLIM5Q96HC4 596 aaKnown RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ZNF285Q96NJ3 590 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 TRAPPC9Q96Q05 1148 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 OR2A14Q96R47 310 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 OR6C1Q96RD1 312 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 DHRS4Q9BTZ2 278 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 RAB17Q9H0T7 212 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 UTP6Q9NYH9 597 aaKnown RBP8.84□□□□□ -0.99
SMC1A-203ENST00000428014 TAS2R13Q9NYV9 303 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ACTR10Q9NZ32 417 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 MOCS1Q9NZB8 636 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 IL1RAPL1Q9NZN1 696 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 LNPEPQ9UIQ6 1025 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 SERTAD3Q9UJW9 196 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 PADI1Q9ULC6 663 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 SRPK3Q9UPE1 567 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ICKQ9UPZ9 632 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 MED16Q9Y2X0 877 aa8.84□□□□□ -0.99
SMC1A-203ENST00000428014 ATRXP46100 2492 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 LOC400499M0QZD8 3231 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 PMS2P1A4D2B8 440 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 EFCAB8A8MWE9 144 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 E5RI56 91 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 H3BMH7 237 aa8.83□□□□□ -1
SMC1A-203ENST00000428014 FANCGO15287 622 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms