RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SSNA1O43805 119 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TRIM3O75382 744 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 CD2P06729 351 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 GALTP07902 379 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 CAPGP40121 348 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 ECH1Q13011 328 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 PON2Q15165 354 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TTMPQ5BVD1 217 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 VASH1Q7L8A9 365 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 FAM110BQ8TC76 370 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 HLA-CQ95604 372 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 WDR92Q96MX6 357 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 FBRSL1Q9HCM7 1045 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 DNAAF2Q9NVR5 837 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SORCS3Q9UPU3 1222 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TIMM22Q9Y584 194 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 LSM1O15116 133 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 COL6A2P12110 1019 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 FOSL1P15407 271 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 BMPR1AP36894 532 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 DRG2P55039 364 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SLBPQ14493 270 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 DNM1P34Q6PK57 102 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 HFE2Q6ZVN8 426 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SYVN1Q86TM6 617 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TFGQ92734 400 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 HAVCR1Q96D42 359 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 CDCA3Q99618 268 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 IL21RQ9HBE5 538 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TXNRD2Q9NNW7 524 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 APOBEC3BQ9UH17 382 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 ADGRE2Q9UHX3 823 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 RARRES3Q9UL19 164 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 FZD10Q9ULW2 581 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 UBOX5O94941 541 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 MAGEA8P43361 318 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 CRISP3P54108 245 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 HNRNPKP61978 463 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 IFI35P80217 286 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 CD47Q08722 323 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 RAB39AQ14964 217 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 MAPK11Q15759 364 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 IL23RQ5VWK5 629 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SLC36A4Q6YBV0 504 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SATL1Q86VE3 508 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 STX12Q86Y82 276 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 DCBLD1Q8N8Z6 715 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TP53INP1Q96A56 240 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 OR2M4Q96R27 311 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 IFT27Q9BW83 186 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 IFT80Q9P2H3 777 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 RAPGEFL1Q9UHV5 662 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 A0A075B6Q4 140 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 A0A1W2PP55 124 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 C2orf74A8MZ97 194 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TRIM38O00635 465 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 GRID2O43424 1007 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SCGNO76038 276 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 IQCF3P0C7M6 154 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 POLR2CP19387 275 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 POLR2JP52435 117 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 MPP1Q00013 466 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 CLCQ05315 142 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 MED22Q15528 200 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 ECM1Q16610 540 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SMARCD3Q6STE5 483 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TMPPEQ6ZT21 453 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 CLEC20AQ6ZU45 233 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 CAND1Q86VP6 1230 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 ZNF611Q8N823 705 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 ABHD5Q8WTS1 349 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 NKD1Q969G9 470 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 C17orf62Q9BQA9 187 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 EFCAB11Q9BUY7 163 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 ADAMTS10Q9H324 1103 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 LRRC19Q9H756 370 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 MTMR11A4FU01 709 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 KPNA4O00629 521 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 OTX2P32243 289 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 KCNQ1P51787 676 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 SOWAHAQ2M3V2 549 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 ZNF792Q3KQV3 632 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 AKIRIN2Q53H80 203 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 NOXRED1Q6NXP6 359 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 METTL27Q8N6F8 245 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 C1orf216Q8TAB5 229 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TWIST2Q8WVJ9 160 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 PRR11Q96HE9 360 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TGM7Q96PF1 710 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 TTYH3Q9C0H2 523 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 OR8D2Q9GZM6 311 aa9.75□□□□□ -0.85
CLTCL1-202ENST00000427926 A0A0J9YYE9 177 aa9.74□□□□□ -0.85
CLTCL1-202ENST00000427926 TCRBV9S1A1TA0A576 114 aa9.74□□□□□ -0.85
CLTCL1-202ENST00000427926 OR5K4A6NMS3 321 aa9.74□□□□□ -0.85
CLTCL1-202ENST00000427926 BBIP1A8MTZ0 92 aa9.74□□□□□ -0.85
CLTCL1-202ENST00000427926 FADS2P1A8MWK0 482 aa9.74□□□□□ -0.85
CLTCL1-202ENST00000427926 PSMD11O00231 422 aa9.74□□□□□ -0.85
CLTCL1-202ENST00000427926 SNAP91O60641 907 aa9.74□□□□□ -0.85
CLTCL1-202ENST00000427926 TULP3O75386 442 aa9.74□□□□□ -0.85
CLTCL1-202ENST00000427926 FARS2O95363 451 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms