RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SIX6OS1Q8N1H7 587 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 ARHGAP18Q8N392 663 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 LEMD2Q8NC56 503 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 MSANTD4Q8NCY6 345 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 STKLD1Q8NE28 680 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 SUN3Q8TAQ9 357 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 DQX1Q8TE96 717 aaKnown RBP5.53□□□□□ -1.52
C9orf3-205ENST00000427193 NTAN1Q96AB6 310 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 FAF2Q96CS3 445 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 TRIM44Q96DX7 344 aaPredicted RBP5.53□□□□□ -1.52
C9orf3-205ENST00000427193 SNX22Q96L94 193 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 CFAP57Q96MR6 1250 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 PEBP4Q96S96 227 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 SEPT5Q99719 369 aaPredicted RBP5.53□□□□□ -1.52
C9orf3-205ENST00000427193 TRIM62Q9BVG3 475 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 PDCL3Q9H2J4 239 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 GOLPH3Q9H4A6 298 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 ABCC13Q9NSE7 274 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 SEPT11Q9NVA2 429 aaKnown RBP5.53□□□□□ -1.52
C9orf3-205ENST00000427193 EHD2Q9NZN4 543 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 STOML2Q9UJZ1 356 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 TTC7AQ9ULT0 858 aaPredicted RBP5.53□□□□□ -1.52
C9orf3-205ENST00000427193 GUCA1BQ9UMX6 200 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 NAALADL1Q9UQQ1 740 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 JRKLQ9Y4A0 524 aa5.53□□□□□ -1.52
C9orf3-205ENST00000427193 APC2O95996 2303 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 DOCK6Q96HP0 2047 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 EME2A4GXA9 379 aaPredicted RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 MIF4GDA9UHW6 222 aaKnown RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 GOLGA8SH3BPF8 625 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 KIF2AO00139 706 aaPredicted RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 PRRG1O14668 218 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 MDM4O15151 490 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 IRAK2O43187 625 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 KIF5CO60282 957 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 GRAP2O75791 330 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 NDUFB8O95169 186 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 KCNK5O95279 499 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TRUB2O95900 331 aaKnown RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TBX18O95935 607 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TDGF1P13385 188 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TFEBP19484 476 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 MIPP30301 263 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 HOXC13P31276 330 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 IDUAP35475 653 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 MARCKSL1P49006 195 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 SLC7A9P82251 487 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 DPYSL2Q16555 572 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 LPAL2Q16609 132 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 SLC5A9Q2M3M2 681 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 C15orf59Q2T9L4 293 aaPredicted RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 C5orf22Q49AR2 442 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 AASDHQ4L235 1098 aaPredicted RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TSSK4Q6SA08 328 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 B4GALNT4Q76KP1 1039 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TAC4Q86UU9 113 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 ITIH5Q86UX2 942 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 FAM217AQ8IXS0 508 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 KATNAL2Q8IYT4 538 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 SLC35F6Q8N357 371 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 RASGEF1CQ8N431 466 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 FAM156AQ8NDB6 213 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 B4GALNT2Q8NHY0 566 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TEKT4Q8WW24 435 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 KRT35Q92764 455 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 FBXO32Q969P5 355 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 AZIN2Q96A70 460 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 C1orf74Q96LT6 269 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 SLITRK1Q96PX8 696 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 SLC22A12Q96S37 553 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TBCBQ99426 244 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 PRMT1Q99873 361 aaKnown RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 NCAPGQ9BPX3 1015 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 ZPBPQ9BS86 351 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 GATA5Q9BWX5 397 aaPredicted RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 CARD9Q9H257 536 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 SLC25A32Q9H2D1 315 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 PRMT8Q9NR22 394 aaPredicted RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 TLR8Q9NR97 1041 aaKnown RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 PIGVQ9NUD9 493 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 ARHGEF38Q9NXL2 777 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 MSRB1Q9NZV6 116 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 EPS15L1Q9UBC2 864 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 UXTQ9UBK9 157 aaPredicted RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 ANAPC7Q9UJX3 599 aa5.52□□□□□ -1.53
C9orf3-205ENST00000427193 MTCL1Q9Y4B5 1905 aaKnown RBP5.52□□□□□ -1.53
C9orf3-205ENST00000427193 CLUHO75153 1309 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 ZNF638Q14966 1978 aaKnown RBP5.51□□□□□ -1.53
C9orf3-205ENST00000427193 C2orf16Q68DN1 1984 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 IGLV3-10A0A075B6K4 115 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 TRBV5-3A0A0A0MS03 114 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 KANSL1LA0AUZ9 987 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 FAM170AA1A519 330 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 TTC34A8MYJ7 566 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 PRSS44E7EML9 344 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 COCHO43405 550 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 PSTPIP1O43586 416 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 FTCDO95954 541 aa5.51□□□□□ -1.53
C9orf3-205ENST00000427193 F9P00740 461 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms