RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SIDT2Q8NBJ9 832 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CD200R1Q8TD46 325 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 ZFPM2Q8WW38 1151 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 ADAMTS14Q8WXS8 1223 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TFGQ92734 400 aaPredicted RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CDKL2Q92772 493 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 KCNJ9Q92806 393 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 INPP5DQ92835 1189 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TMEM159Q96B96 161 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 SH3KBP1Q96B97 665 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 FAM136AQ96C01 138 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CXorf40BQ96DE9 158 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 C12orf66Q96MD2 445 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 FERD3LQ96RJ6 166 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 NDNQ99608 321 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 GPR21Q99679 349 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CCDC3Q9BQI4 270 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TBC1D10AQ9BXI6 508 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 PARD6BQ9BYG5 372 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CCDC68Q9H2F9 335 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 LRRN3Q9H3W5 708 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 RHOJQ9H4E5 214 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 UCK1Q9HA47 277 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 POT1Q9NUX5 634 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 IMP3Q9NV31 184 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 NSMCE4AQ9NXX6 385 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CORO1CQ9ULV4 474 aaPredicted RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 TRIM33Q9UPN9 1127 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 CFAP20Q9Y6A4 193 aaKnown RBP7.22□□□□□ -1.25
LINC01049-201ENST00000426840 SPTBN4Q9H254 2564 aa7.22□□□□□ -1.25
LINC01049-201ENST00000426840 IGHV1OR21-1A0A087WYE8 117 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 HMX2A2RU54 273 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 LILRA5A6NI73 299 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 E5RI56 91 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 IFRD1O00458 451 aaPredicted RBP7.21□□□□□ -1.26
LINC01049-201ENST00000426840 RIPK2O43353 540 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 VPS26AO75436 327 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 MATN4O95460 622 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 ACSL3O95573 720 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 TOP3BO95985 862 aaKnown RBP7.21□□□□□ -1.26
LINC01049-201ENST00000426840 MPC1LP0DKB6 136 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 CDK4P11802 303 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 FDXRP22570 491 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 ALDH4A1P30038 563 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 PHBP35232 272 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 SKIV2L2P42285 1042 aaKnown RBP7.21□□□□□ -1.26
LINC01049-201ENST00000426840 CLDN6P56747 220 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 NAB1Q13506 487 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 GPR18Q14330 331 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 GRB7Q14451 532 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 SLC29A2Q14542 456 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 EFTUD2Q15029 972 aaKnown RBP eCLIP7.21□□□□□ -1.26
LINC01049-201ENST00000426840 TMED2Q15363 201 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 KLHL38Q2WGJ6 581 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 SYTL3Q4VX76 610 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 GRTP1Q5TC63 336 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 FAM45BPQ6NSW5 357 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 PAQR3Q6TCH7 311 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 ZNF574Q6ZN55 896 aaPredicted RBP7.21□□□□□ -1.26
LINC01049-201ENST00000426840 USP53Q70EK8 1073 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 DGLUCYQ7Z3D6 616 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 TMPRSS9Q7Z410 1059 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 TRIM48Q8IWZ4 208 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 CTAGE3PQ8IX95 158 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 CACTIN-AS1Q8N1I8 211 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 CHCHD4Q8N4Q1 142 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 ZBTB2Q8N680 514 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 GPATCH11Q8N954 259 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 AVL9Q8NBF6 648 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 OR5AR1Q8NGP9 310 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 UHMK1Q8TAS1 419 aaKnown RBP7.21□□□□□ -1.26
LINC01049-201ENST00000426840 FAM45AQ8TCE6 357 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 VPS39Q96JC1 886 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 CYTH2Q99418 400 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 SLC38A3Q99624 504 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 RBBP8Q99708 897 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 NRTNQ99748 197 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 OLFM1Q99784 485 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 CPNE1Q99829 537 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.21□□□□□ -1.26
LINC01049-201ENST00000426840 TWSG1Q9GZX9 223 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 RASSF4Q9H2L5 321 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 ACSS3Q9H6R3 686 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 KIR3DX1Q9H7L2 352 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 MVB12BQ9H7P6 319 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 TAS2R13Q9NYV9 303 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 OGFRQ9NZT2 677 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 EGFL7Q9UHF1 273 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 SLC24A2Q9UI40 661 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 RAB21Q9UL25 225 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 WASF3Q9UPY6 502 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 HEBP2Q9Y5Z4 205 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 NFS1Q9Y697 457 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 COLEC10Q9Y6Z7 277 aa7.21□□□□□ -1.26
LINC01049-201ENST00000426840 SPTBN2O15020 2390 aa7.2□□□□□ -1.26
LINC01049-201ENST00000426840 CFAP54Q96N23 3096 aa7.2□□□□□ -1.26
LINC01049-201ENST00000426840 COL27A1Q8IZC6 1860 aaPredicted RBP7.2□□□□□ -1.26
LINC01049-201ENST00000426840 A0A087WUV0 522 aaPredicted RBP7.2□□□□□ -1.26
LINC01049-201ENST00000426840 FAM95CA0A1B0GW59 222 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms