RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 PDE12Q6L8Q7 609 aaKnown RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 AQP12AQ8IXF9 295 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 RGL4Q8IZJ4 473 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 MCOLN3Q8TDD5 553 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 RORBQ92753 470 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 RPL3LQ92901 407 aaKnown RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 HPS1Q92902 700 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 ZNF599Q96NL3 588 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 C11orf49Q9H6J7 331 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 ZFYVE1Q9HBF4 777 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 SAMHD1Q9Y3Z3 626 aaKnown RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 CACNA1CQ13936 2221 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 ELOVL7A1L3X0 281 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 LCHNA4D1U4 455 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 RFXANKO14593 260 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 UGT2B4P06133 528 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 FCGR1AP12314 374 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 BMP2P12643 396 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 CSF2RAP15509 400 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 ZNF7P17097 686 aaPredicted RBP13.08□□□□□ -0.31
USP42-203ENST00000426246 SOAT1P35610 550 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 CSKP41240 450 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 CYP4F8P98187 520 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 CBX3Q13185 183 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 DAG1Q14118 895 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 ZNF554Q86TJ5 538 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 CACTIN-AS1Q8N1I8 211 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 UBE2J2Q8N2K1 259 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 FBXO22Q8NEZ5 403 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 OR7A2PQ8NGA2 310 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 CD200R1Q8TD46 325 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 REXO5Q96IC2 774 aaKnown RBP13.08□□□□□ -0.31
USP42-203ENST00000426246 MAGED4Q96JG8 741 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 BARD1Q99728 777 aaKnown RBP13.08□□□□□ -0.31
USP42-203ENST00000426246 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 FAM126AQ9BYI3 521 aaPredicted RBP13.08□□□□□ -0.31
USP42-203ENST00000426246 LRTM1Q9HBL6 345 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 SLC6A13Q9NSD5 602 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 SPASTQ9UBP0 616 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 PDE10AQ9Y233 779 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 SLC22A14Q9Y267 594 aa13.08□□□□□ -0.31
USP42-203ENST00000426246 ANAPC1Q9H1A4 1944 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 OBSL1O75147 1896 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 BBIP1A8MTZ0 92 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 PER2O15055 1255 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 RGS5O15539 181 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 COCHO43405 550 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 DLGAP3O95886 979 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 STATHP02808 62 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 PGRP06401 933 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 PFKLP17858 780 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 ITGALP20701 1170 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 CA5AP35218 305 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 UBE3AQ05086 875 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 BCL2L1Q07817 233 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 CCNYL2Q5T2Q4 361 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 P3H2Q8IVL5 708 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 CENPSQ8N2Z9 138 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 NETO1Q8TDF5 533 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 SCAMP4Q969E2 229 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 DACH2Q96NX9 599 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 CLSTN3Q9BQT9 956 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 GPATCH1Q9BRR8 931 aaKnown RBP13.08□□□□□ -0.32
USP42-203ENST00000426246 TPK1Q9H3S4 243 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 CARS2Q9HA77 564 aaKnown RBP13.08□□□□□ -0.32
USP42-203ENST00000426246 PDP1Q9P0J1 537 aaPredicted RBP13.08□□□□□ -0.32
USP42-203ENST00000426246 TESMINQ9Y4I5 508 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 EVPLLA8MZ36 301 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 KIAA0355O15063 1070 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 ANGPTL1O95841 491 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 GPIP06744 558 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.32
USP42-203ENST00000426246 RPIAP49247 311 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 ACADVLP49748 655 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 NCS1P62166 190 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 CD47Q08722 323 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 SMARCB1Q12824 385 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 STARD3Q14849 445 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 C2orf15Q8WU43 125 aaKnown RBP13.08□□□□□ -0.32
USP42-203ENST00000426246 ERVK-18Q9QC07 812 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 BACE2Q9Y5Z0 518 aa13.08□□□□□ -0.32
USP42-203ENST00000426246 TRANK1O15050 2925 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 MROH6A6NGR9 719 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 SLC38A8A6NNN8 435 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 SLC22A2O15244 555 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 PTNP21246 168 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 EPHA2P29317 976 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 MAGEA10P43363 369 aaPredicted RBP13.07□□□□□ -0.32
USP42-203ENST00000426246 ZNF135P52742 658 aaPredicted RBP13.07□□□□□ -0.32
USP42-203ENST00000426246 WDR5P61964 334 aaKnown RBP13.07□□□□□ -0.32
USP42-203ENST00000426246 PABPC1LQ4VXU2 614 aaKnown RBP13.07□□□□□ -0.32
USP42-203ENST00000426246 CTSL3PQ5NE16 218 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 IER5LQ5T953 404 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 SYT12Q8IV01 421 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 APCDD1Q8J025 514 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 NCSTNQ92542 709 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 TTLL2Q9BWV7 592 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 EPB41L1Q9H4G0 881 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms