RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 CFAP52Q8N1V2 620 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 PYROXD2Q8N2H3 581 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 CLIP4Q8N3C7 705 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 DCBLD1Q8N8Z6 715 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 C12orf43Q96C57 262 aaKnown RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 TVP23BQ9NYZ1 205 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 MYH14Q7Z406 1995 aaKnown RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 AKAP8O43823 692 aaKnown RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 HCN1O60741 890 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 IL1BP01584 269 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 GIMD1P0DJR0 217 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 POU2F1P14859 743 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 ATP13A5Q4VNC0 1218 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 UBE2J2Q8N2K1 259 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 DNASE1L2Q92874 299 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 TMBIM1Q969X1 311 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 HSPBAP1Q96EW2 488 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 CLCC1Q96S66 551 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 GPER1Q99527 375 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 FBXW11Q9UKB1 542 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 POFUT2Q9Y2G5 429 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 PCDHGA11Q9Y5H2 935 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 PRORSD1PA6NEY8 169 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 TCAF2A6NFQ2 919 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 INSIG1O15503 277 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 CD72P21854 359 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 YAP1P46937 504 aaKnown RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 NDUFV1P49821 464 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 CLCN4P51793 760 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 IRF9Q00978 393 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 HEPACAMQ14CZ8 416 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 ULK3Q6PHR2 472 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 SLC22A16Q86VW1 577 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 FATE1Q969F0 183 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 EXOSC8Q96B26 276 aaKnown RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 DEFB118Q96PH6 123 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 PDZD7Q9H5P4 517 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 RC3H2Q9HBD1 1191 aaKnown RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 AP1S1P61966 158 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 DGKZQ13574 1117 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 POM121L1PQ3SYA9 428 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 ZNF773Q6PK81 442 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 LINGO2Q7L985 606 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 KLHL36Q8N4N3 616 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 SIDT2Q8NBJ9 832 aaKnown RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 ZBED3Q96IU2 234 aaPredicted RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 GPR20Q99678 358 aa13.56□□□□□ -0.24
SREBF2-202ENST00000424354 APOBEC3GQ9HC16 384 aaKnown RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 CCDC177Q9NQR7 707 aaPredicted RBP13.56□□□□□ -0.24
SREBF2-202ENST00000424354 NOTOA8MTQ0 251 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 TLL1O43897 1013 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 CDH15P55291 814 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 CPNE9Q8IYJ1 553 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 OR4C6Q8NH72 309 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 GAS2L1Q99501 681 aaPredicted RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 TUBA1CQ9BQE3 449 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 DUSP26Q9BV47 211 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 THUMPD1Q9NXG2 353 aaKnown RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 HECAQ9UBI9 543 aaPredicted RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 A0A0G2JPF8 293 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 ANXA2P2A6NMY6 339 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 HNRNPCL3B7ZW38 293 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 MT-CYBP00156 380 aaPredicted RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 ANXA2P07355 339 aaKnown RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 HNRNPCL4P0DMR1 293 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 CSTF2P33240 577 aaKnown RBP eCLIP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 BRCC3P46736 316 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 KHKP50053 298 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 MADCAM1Q13477 382 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 CAMK1Q14012 370 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 TOMM20Q15388 145 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 TMEM198Q66K66 360 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 SERPINA9Q86WD7 417 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 C15orf40Q8WUR7 153 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 FCRL5Q96RD9 977 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 POLR2J3Q9H1A7 115 aaKnown RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 SLC6A15Q9H2J7 730 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 SNED1Q8TER0 1413 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 FAM189A1O60320 539 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 C1RP00736 705 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 ARCN1P48444 511 aaKnown RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 CSTF1Q05048 431 aaKnown RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 SCRN3Q0VDG4 424 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 TAF10Q12962 218 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 ZNF234Q14588 700 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 CCDC107Q8WV48 283 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 DNAJA4Q8WW22 397 aaPredicted RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 AURKBQ96GD4 344 aaPredicted RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 EBPLQ9BY08 206 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 OXCT2Q9BYC2 517 aaPredicted RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 ATG10Q9H0Y0 220 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 PRELID1Q9Y255 219 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 SPIN1Q9Y657 262 aaPredicted RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 FKBP7Q9Y680 259 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 CACNB4O00305 520 aaPredicted RBP13.55□□□□□ -0.24
SREBF2-202ENST00000424354 MAB21L1Q13394 359 aa13.55□□□□□ -0.24
SREBF2-202ENST00000424354 LDLRAD1Q5T700 205 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms