RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 HOMER3Q9NSC5 361 aa16.21■□□□□ 0.19
CCDC78-203ENST00000423653 IRAK4Q9NWZ3 460 aa16.21■□□□□ 0.19
CCDC78-203ENST00000423653 PLAGL1Q9UM63 463 aa16.21■□□□□ 0.19
CCDC78-203ENST00000423653 DRG1Q9Y295 367 aaKnown RBP16.21■□□□□ 0.19
CCDC78-203ENST00000423653 MRFAP1Q9Y605 127 aa16.21■□□□□ 0.19
CCDC78-203ENST00000423653 KPNA5O15131 536 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 PFDN6O15212 129 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 CD3EAPO15446 510 aaKnown RBP16.2■□□□□ 0.18
CCDC78-203ENST00000423653 ZSCAN9O15535 394 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-203ENST00000423653 ZSCAN5DPP0CG00 497 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 PTGIRP43119 386 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 RRADP55042 308 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 CDK16Q00536 496 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 SEMA3AQ14563 771 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 DEFB110Q30KQ9 67 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 RHBDD2Q6NTF9 364 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 TLDC1Q6P9B6 456 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 TTC23LQ6PF05 361 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 RAB42Q8N4Z0 105 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 ADAMTS17Q8TE56 1095 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 CHRAC1Q9NRG0 131 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 TREX1Q9NSU2 369 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 TXLNGQ9NUQ3 528 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 INTS7Q9NVH2 962 aaKnown RBP16.2■□□□□ 0.18
CCDC78-203ENST00000423653 SPHK1Q9NYA1 384 aa16.2■□□□□ 0.18
CCDC78-203ENST00000423653 GPN3Q9UHW5 284 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-203ENST00000423653 K7EM74 188 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 GPC4O75487 556 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 NDUFS3O75489 264 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 TMEM63AO94886 807 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 S1PR4O95977 384 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 CD63P08962 238 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 AOAHP28039 575 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 NPY2RP49146 381 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 CRADDP78560 199 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 CHAF1BQ13112 559 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 KYNUQ16719 465 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 RNF187Q5TA31 235 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-203ENST00000423653 LCN10Q6JVE6 187 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 MRNIPQ6NTE8 343 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 TMEM102Q8N9M5 508 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-203ENST00000423653 CFAP61Q8NHU2 1237 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 FLVCR1-AS1Q8TAF5 88 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 LKAAEAR1Q8TD35 194 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 IP6K3Q96PC2 410 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 MRM3Q9HC36 420 aaKnown RBP16.19■□□□□ 0.18
CCDC78-203ENST00000423653 FAM60AQ9NP50 221 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 MARCH4Q9P2E8 410 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-203ENST00000423653 CDYLQ9Y232 598 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 PCDHGB7Q9Y5F8 929 aa16.19■□□□□ 0.18
CCDC78-203ENST00000423653 IQCF5A8MTL0 148 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 CEP104O60308 925 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 SLCO2B1O94956 709 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 CAPN1P07384 714 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 TPSB2P20231 275 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 RPS3P23396 243 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC78-203ENST00000423653 SARNPP82979 210 aaKnown RBP16.18■□□□□ 0.18
CCDC78-203ENST00000423653 TPSAB1Q15661 275 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 ZIC1Q15915 447 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 ARMC3Q5W041 872 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 ZNF385CQ66K41 422 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-203ENST00000423653 MED25Q71SY5 747 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 OTOAQ7RTW8 1153 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 ATCAYQ86WG3 371 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 VRK3Q8IV63 474 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 DENND1AQ8TEH3 1009 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 DLG3Q92796 817 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 NDOR1Q9UHB4 597 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 PLCL2Q9UPR0 1127 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 ZNF451Q9Y4E5 1061 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 SPTBP11277 2137 aa16.18■□□□□ 0.18
CCDC78-203ENST00000423653 H3BMH7 237 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 FKBP9O95302 570 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 TPBGLP0DKB5 382 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 MAGP20916 626 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 CD9P21926 228 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 PEBP1P30086 187 aaKnown RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 GABRA4P48169 554 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 CCL11P51671 97 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 EIF3BP55884 814 aaKnown RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 DCDP81605 110 aaKnown RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 PAPD7Q5XG87 772 aaKnown RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 LRRC8BQ6P9F7 803 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 SDCCAG8Q86SQ7 713 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 LDB1Q86U70 411 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 HPS6Q86YV9 775 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 KRT222Q8N1A0 295 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 OR2L8Q8NGY9 312 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 SKA2Q8WVK7 121 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 FOPNLQ96NB1 174 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 NDC1Q9BTX1 674 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 KIFC1Q9BW19 673 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 P2RY12Q9H244 342 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 SYBUQ9NX95 663 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 IFT80Q9P2H3 777 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-203ENST00000423653 SLC39A10Q9ULF5 831 aa16.17■□□□□ 0.18
CCDC78-203ENST00000423653 H3BMM5 538 aa16.16■□□□□ 0.18
CCDC78-203ENST00000423653 RASGRF2O14827 1237 aa16.16■□□□□ 0.18
CCDC78-203ENST00000423653 IGHEP01854 428 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms