RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZW10O43264 779 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 UBXN7O94888 489 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 TOP3BO95985 862 aaKnown RBP16.49■□□□□ 0.23
COL7A1-202ENST00000422991 ENO2P09104 434 aaPredicted RBP16.49■□□□□ 0.23
COL7A1-202ENST00000422991 FTH1P19P0C7X4 201 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 PYGBP11216 843 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 COL6A2P12110 1019 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 TFEBP19484 476 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 PKLRP30613 574 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 SHMT2P34897 504 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 CAPZBP47756 277 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 RAB28P51157 221 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 CCL7P80098 99 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 GPLD1P80108 840 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 SIM1P81133 766 aaPredicted RBP16.49■□□□□ 0.23
COL7A1-202ENST00000422991 OR4D1Q15615 310 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 CROCCP2Q86T23 111 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 PLD6Q8N2A8 252 aaKnown RBP16.49■□□□□ 0.23
COL7A1-202ENST00000422991 OR9A1PQ8NGU1 263 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 OR10G6Q8NH81 332 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 MCOLN3Q8TDD5 553 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 DENND1AQ8TEH3 1009 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 RSC1A1Q92681 617 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 KIAA1191Q96A73 305 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 GPR78Q96P69 363 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 PKP4Q99569 1192 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 RAB11FIP5Q9BXF6 653 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 LRRN3Q9H3W5 708 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 SRMSQ9H3Y6 488 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 XKR8Q9H6D3 395 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 SPATA7Q9P0W8 599 aa16.49■□□□□ 0.23
COL7A1-202ENST00000422991 A0A1W2PQM1 296 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 GOLGA8RI6L899 631 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 NTN3O00634 580 aaPredicted RBP16.48■□□□□ 0.23
COL7A1-202ENST00000422991 DUX1O43812 170 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 OPA1O60313 960 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 RPLP0P05388 317 aaKnown RBP16.48■□□□□ 0.23
COL7A1-202ENST00000422991 PROS1P07225 676 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 ERGP11308 486 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 CD1CP29017 333 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 CSF2RBP32927 897 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 AP1S2P56377 157 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 N4BP2L1Q5TBK1 243 aaPredicted RBP16.48■□□□□ 0.23
COL7A1-202ENST00000422991 NKAIN2Q5VXU1 208 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 KLHL35Q6PF15 583 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 SH2D5Q6ZV89 423 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 SLCO6A1Q86UG4 719 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 TRABD2AQ86V40 505 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 AMIGO1Q86WK6 493 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 OR4E2Q8NGC2 313 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 IL17FQ96PD4 163 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 TWSG1Q9GZX9 223 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 ALG9Q9H6U8 611 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 RDH14Q9HBH5 336 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 OARD1Q9Y530 152 aa16.48■□□□□ 0.23
COL7A1-202ENST00000422991 UNC13CQ8NB66 2214 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 CCDC189A1A4V9 331 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 OR6C74A6NCV1 312 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 OR5K3A6NET4 321 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 RGS16O15492 202 aaPredicted RBP16.47■□□□□ 0.23
COL7A1-202ENST00000422991 KERAO60938 352 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 SLC16A8O95907 504 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 SYF2O95926 243 aaKnown RBP16.47■□□□□ 0.23
COL7A1-202ENST00000422991 TYRP1P17643 537 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 GLRBP48167 497 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 E2F1Q01094 437 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 SQSTM1Q13501 440 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 ACAP2Q15057 778 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 CYP2A13Q16696 494 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 AMZ1Q400G9 498 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 CCDC157Q569K6 752 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 KLC3Q6P597 504 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 MBOAT1Q6ZNC8 495 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 HDXQ7Z353 690 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 ISCA2Q86U28 154 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 LCA5Q86VQ0 697 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 ADGRF3Q8IZF5 1079 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 LINC01555Q8NAE3 123 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 OR2L8Q8NGY9 312 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 WDR48Q8TAF3 677 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 AHCYL2Q96HN2 611 aaKnown RBP16.47■□□□□ 0.23
COL7A1-202ENST00000422991 TRIM54Q9BYV2 358 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 ZNF358Q9NW07 568 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 ARL15Q9NXU5 204 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 OR6C2Q9NZP2 312 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 APOBEC2Q9Y235 224 aaKnown RBP16.47■□□□□ 0.23
COL7A1-202ENST00000422991 SPEGQ15772 3267 aa16.47■□□□□ 0.23
COL7A1-202ENST00000422991 PABPN1LA6NDY0 278 aaKnown RBP16.46■□□□□ 0.23
COL7A1-202ENST00000422991 D6RAR5 112 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 BTN3A3O00478 584 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 CPNE6O95741 557 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 HIST1H2AGP0C0S8 130 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-202ENST00000422991 CDK4P11802 303 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 AMD1P17707 334 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 HIST1H2ADP20671 130 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 IMPA1P29218 277 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 CDKL1Q00532 357 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 CFHR1Q03591 330 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 SLC18A2Q05940 514 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms