RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 KIR2DS3Q14952 304 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 SF1Q15637 639 aaKnown RBP8.97□□□□□ -0.97
NUP50-206ENST00000422489 ZIC1Q15915 447 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 DEFB110Q30KQ9 67 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 DNAJC21Q5F1R6 531 aaKnown RBP8.97□□□□□ -0.97
NUP50-206ENST00000422489 FAM69BQ5VUD6 431 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 CASC4Q6P4E1 433 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 LRRC8BQ6P9F7 803 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 TAX1BP1Q86VP1 789 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 SYTL1Q8IYJ3 562 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 SLC22A15Q8IZD6 547 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 ZNF655Q8N720 491 aaPredicted RBP8.97□□□□□ -0.97
NUP50-206ENST00000422489 PRELID2Q8N945 189 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 PEX13Q92968 403 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 MAGOHBQ96A72 148 aaKnown RBP8.97□□□□□ -0.97
NUP50-206ENST00000422489 LRFN5Q96NI6 719 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 TRIM55Q9BYV6 548 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 EIF2B3Q9NR50 452 aaKnown RBP8.97□□□□□ -0.97
NUP50-206ENST00000422489 SYBUQ9NX95 663 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 OR6C2Q9NZP2 312 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 GPN3Q9UHW5 284 aaPredicted RBP8.97□□□□□ -0.97
NUP50-206ENST00000422489 GNPTGQ9UJJ9 305 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 ANAPC2Q9UJX6 822 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 CFAP46Q8IYW2 2715 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 LOC400499M0QZD8 3231 aa8.97□□□□□ -0.97
NUP50-206ENST00000422489 A6NL46 340 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 C9J4A7 227 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 PFDN6O15212 129 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 HCRTR1O43613 425 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 AVILO75366 819 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 GPC4O75487 556 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 CTSBP07858 339 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 RAB40ALP0C0E4 278 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 CBSLP0DN79 551 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 CHRM3P20309 590 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 CD9P21926 228 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 ALAS2P22557 587 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 AOAHP28039 575 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 OTX2P32243 289 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 RORAP35398 523 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 CBSP35520 551 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 CASRP41180 1078 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 GRIA3P42263 894 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 RAB28P51157 221 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 PMS2P54278 862 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 CDK16Q00536 496 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 KLRB1Q12918 225 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 IL10RAQ13651 578 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 KYNUQ16719 465 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 SLC5A12Q1EHB4 618 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 ZNF789Q5FWF6 425 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 IZUMO3Q5VZ72 239 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 MRNIPQ6NTE8 343 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 TCTN3Q6NUS6 607 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 OTOAQ7RTW8 1153 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 MCATQ8IVS2 390 aaKnown RBP8.96□□□□□ -0.98
NUP50-206ENST00000422489 DNAJC22Q8N4W6 341 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 SLC22A18Q96BI1 424 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 FAM136AQ96C01 138 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 MFSD3Q96ES6 412 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 SGSM3Q96HU1 749 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 MS4A14Q96JA4 679 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 FOPNLQ96NB1 174 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 PANX3Q96QZ0 392 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 NDC1Q9BTX1 674 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 SLC25A23Q9BV35 468 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 NLNQ9BYT8 704 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 ING2Q9H160 280 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 EPN3Q9H201 632 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 P2RY12Q9H244 342 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 TREX1Q9NSU2 369 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 TXLNGQ9NUQ3 528 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 DHCR7Q9UBM7 475 aaKnown RBP8.96□□□□□ -0.98
NUP50-206ENST00000422489 TCFL5Q9UL49 500 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 PLCL2Q9UPR0 1127 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 CDYLQ9Y232 598 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 AP1M2Q9Y6Q5 423 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 PIEZO2Q9H5I5 2752 aa8.96□□□□□ -0.98
NUP50-206ENST00000422489 SMG1Q96Q15 3661 aaKnown RBP8.95□□□□□ -0.98
NUP50-206ENST00000422489 GOLGA8MH3BSY2 632 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 RASGRF2O14827 1237 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 KPNA5O15131 536 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 ZNF185O15231 689 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 TMEM63AO94886 807 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 SLCO2B1O94956 709 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 TPSB2P20231 275 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 MAGP20916 626 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 PEBP1P30086 187 aaKnown RBP8.95□□□□□ -0.98
NUP50-206ENST00000422489 PKLRP30613 574 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 PTGIRP43119 386 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 DCDP81605 110 aaKnown RBP8.95□□□□□ -0.98
NUP50-206ENST00000422489 THOC5Q13769 683 aaKnown RBP8.95□□□□□ -0.98
NUP50-206ENST00000422489 SLC9A5Q14940 896 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 TPSAB1Q15661 275 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 CPZQ66K79 652 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 TTC27Q6P3X3 843 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 CNSTQ6PJW8 725 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 UNC5DQ6UXZ4 953 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 LRRC6Q86X45 466 aa8.95□□□□□ -0.98
NUP50-206ENST00000422489 APLFQ8IW19 511 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms