RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 BDKRB1P46663 353 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 IRF8Q02556 426 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 PTSQ03393 145 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 ANKDD1AQ495B1 522 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-213ENST00000421756 XKR6Q5GH73 641 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 AQP12AQ8IXF9 295 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 C12orf43Q96C57 262 aaKnown RBP13.04□□□□□ -0.32
MCF2L-213ENST00000421756 FBXL8Q96CD0 374 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 BARD1Q99728 777 aaKnown RBP13.04□□□□□ -0.32
MCF2L-213ENST00000421756 ACPTQ9BZG2 426 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 PAIP1Q9H074 479 aaKnown RBP13.04□□□□□ -0.32
MCF2L-213ENST00000421756 P2RY12Q9H244 342 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 MANBAO00462 879 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 XYLBO75191 536 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 COL6A1P12109 1028 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 BMP2P12643 396 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 HSD17B1P14061 328 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 PHC1P78364 1004 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 IL5RAQ01344 420 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 SLC14A1Q13336 389 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 GPRC6AQ5T6X5 926 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 OR52J3Q8NH60 311 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 SLC47A1Q96FL8 570 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 ZNF583Q96ND8 569 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 TOR3AQ9H497 397 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 SUV39H2Q9H5I1 410 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 SLC25A37Q9NYZ2 338 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 SPG21Q9NZD8 308 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 TNPO3Q9Y5L0 923 aaKnown RBP13.03□□□□□ -0.32
MCF2L-213ENST00000421756 G3V2T6 193 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 MATN4O95460 622 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 ASLP04424 464 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 ZNF182P17025 639 aaPredicted RBP13.03□□□□□ -0.32
MCF2L-213ENST00000421756 PAX3P23760 479 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 PIGAP37287 484 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 HNF4AP41235 474 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 PSMD7P51665 324 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 CTBSQ01459 385 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 OCA2Q04671 838 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 TEAD2Q15562 447 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 ZXDCQ2QGD7 858 aaPredicted RBP13.03□□□□□ -0.32
MCF2L-213ENST00000421756 LY6G5CQ5SRR4 150 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 TMTC4Q5T4D3 741 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 LCN8Q6JVE9 175 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 OGFOD2Q6N063 350 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 SZRD1Q7Z422 152 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 DCAF4L2Q8NA75 395 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 UBE2FQ969M7 185 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 RIOK2Q9BVS4 552 aaKnown RBP13.03□□□□□ -0.32
MCF2L-213ENST00000421756 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
MCF2L-213ENST00000421756 POPDC3Q9HBV1 291 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 MAGEE1Q9HCI5 957 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 IFT80Q9P2H3 777 aaPredicted RBP13.03□□□□□ -0.32
MCF2L-213ENST00000421756 ABCD2Q9UBJ2 740 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 PHF24Q9UPV7 400 aa13.03□□□□□ -0.32
MCF2L-213ENST00000421756 GNG14A0A1W2PPG7 69 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 ACOX3O15254 700 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 VPS4BO75351 444 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 CLDN9O95484 217 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 CD247P20963 164 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 SNRPD1P62314 119 aaKnown RBP13.02□□□□□ -0.32
MCF2L-213ENST00000421756 B4GALNT1Q00973 533 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 DYNC1I2Q13409 638 aaKnown RBP13.02□□□□□ -0.32
MCF2L-213ENST00000421756 SYTL3Q4VX76 610 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 CES5AQ6NT32 575 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 CNIH3Q8TBE1 160 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 PANX1Q96RD7 426 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 SLC52A3Q9NQ40 469 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 WASH3PC4AMC7 463 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 CXCR6O00574 342 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 RFXANKO14593 260 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 DEAF1O75398 565 aaPredicted RBP13.02□□□□□ -0.32
MCF2L-213ENST00000421756 CAPN15O75808 1086 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 MAP4P27816 1152 aaKnown RBP13.02□□□□□ -0.32
MCF2L-213ENST00000421756 EMX2Q04743 252 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 TTLL9Q3SXZ7 439 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 CYBRD1Q53TN4 286 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 NEK5Q6P3R8 708 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 ABRAXAS1Q6UWZ7 409 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 UTS2BQ765I0 119 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 CHST9Q7L1S5 443 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 SYT12Q8IV01 421 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 ANKFN1Q8N957 763 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 GTF2H4Q92759 462 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 RHNO1Q9BSD3 238 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 SLC2A11Q9BYW1 496 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 ELAC1Q9H777 363 aaKnown RBP13.02□□□□□ -0.32
MCF2L-213ENST00000421756 IL21Q9HBE4 155 aa13.02□□□□□ -0.32
MCF2L-213ENST00000421756 ELOVL7A1L3X0 281 aa13.02□□□□□ -0.33
MCF2L-213ENST00000421756 ATE1O95260 518 aa13.02□□□□□ -0.33
MCF2L-213ENST00000421756 FMO3P31513 532 aa13.02□□□□□ -0.33
MCF2L-213ENST00000421756 ACOX1Q15067 660 aa13.02□□□□□ -0.33
MCF2L-213ENST00000421756 CRTC3Q6UUV7 619 aa13.02□□□□□ -0.33
MCF2L-213ENST00000421756 USP45Q70EL2 814 aa13.02□□□□□ -0.33
MCF2L-213ENST00000421756 TMEM179BQ7Z7N9 219 aa13.02□□□□□ -0.33
MCF2L-213ENST00000421756 SNX29P2Q8IUI4 249 aa13.02□□□□□ -0.33
MCF2L-213ENST00000421756 SYTL1Q8IYJ3 562 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms