RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 ZIC1Q15915 447 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 SHISA6Q6ZSJ9 500 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 TTLL10Q6ZVT0 673 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 CD163Q86VB7 1156 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 ADGRF3Q8IZF5 1079 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 DNAJC22Q8N4W6 341 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 ARMC2Q8NEN0 867 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 OR2L2Q8NH16 312 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 FAM222BQ8WU58 562 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 NELFBQ8WX92 580 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 SMARCE1Q969G3 411 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 C8orf44Q96CB5 159 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 SEC16BQ96JE7 1060 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 CCM2Q9BSQ5 444 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 SNRNP25Q9BV90 132 aaKnown RBP8.6□□□□□ -1.03
TRIM39-206ENST00000420746 ADGRE3Q9BY15 652 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 ZWILCHQ9H900 591 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 MAGEE1Q9HCI5 957 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 IRAK4Q9NWZ3 460 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 MEGF8Q7Z7M0 2845 aa8.6□□□□□ -1.03
TRIM39-206ENST00000420746 IGHV1-45A0A0A0MS14 117 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 DDX3XO00571 662 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CDK2AP1O14519 115 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CTSBP07858 339 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CD46P15529 392 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 ZNF24P17028 368 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CD53P19397 219 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 SERPINB6P35237 376 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 PTGS2P35354 604 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CDR2Q01850 454 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 DSC2Q02487 901 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 ZNF33BQ06732 778 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 KRT33BQ14525 404 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 DAZAP2Q15038 168 aaPredicted RBP8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CAMK4Q16566 473 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 FLYWCH1Q4VC44 716 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 ATP13A5Q4VNC0 1218 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 TFDP3Q5H9I0 405 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 Q5PR19 223 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 LDLRAP1Q5SW96 308 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 SARM1Q6SZW1 724 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 TMCO3Q6UWJ1 677 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 NEK10Q6ZWH5 1172 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 AMIGO1Q86WK6 493 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 PHF13Q86YI8 300 aaPredicted RBP8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CCDC71Q8IV32 467 aaPredicted RBP8.59□□□□□ -1.03
TRIM39-206ENST00000420746 RASGEF1AQ8N9B8 481 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 DDHD1Q8NEL9 900 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 SLC30A5Q8TAD4 765 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 GDAP1Q8TB36 358 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 ARRDC2Q8TBH0 407 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 STT3BQ8TCJ2 826 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 MAML1Q92585 1016 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 FATE1Q969F0 183 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 RMDN2Q96LZ7 410 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 MCEEQ96PE7 176 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 OLFM1Q99784 485 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 MESP1Q9BRJ9 268 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 VPS16Q9H269 839 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 GOLPH3LQ9H4A5 285 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 DEF6Q9H4E7 631 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 PLEKHF2Q9H8W4 249 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 NLRC4Q9NPP4 1024 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 DMRT3Q9NQL9 472 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CRIM1Q9NZV1 1036 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 CWC15Q9P013 229 aaKnown RBP8.59□□□□□ -1.03
TRIM39-206ENST00000420746 ADAM22Q9P0K1 906 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 GNPTGQ9UJJ9 305 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 C3orf18Q9UK00 162 aa8.59□□□□□ -1.03
TRIM39-206ENST00000420746 ANK3Q12955 4377 aaKnown RBP8.59□□□□□ -1.04
TRIM39-206ENST00000420746 IGLV3-12A0A075B6K2 115 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 LOC102723996A0A087X1L8 192 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 A0A0J9YY10 115 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 USP27XA6NNY8 438 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 RASGRF2O14827 1237 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 MT-CYBP00156 380 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-206ENST00000420746 ZGLP1P0C6A0 271 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 ITGAMP11215 1152 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 PRKCSHP14314 528 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-206ENST00000420746 BMP7P18075 431 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 CXCR2P25025 360 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 CD86P42081 329 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 NSFP46459 744 aaKnown RBP8.58□□□□□ -1.04
TRIM39-206ENST00000420746 RPL7AP62424 266 aaKnown RBP8.58□□□□□ -1.04
TRIM39-206ENST00000420746 FMO1Q01740 532 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 OCA2Q04671 838 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 AP1B1Q10567 949 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 TUBA3CQ13748 450 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 LONRF2Q1L5Z9 754 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 SLC25A35Q3KQZ1 300 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 PPP6R3Q5H9R7 873 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-206ENST00000420746 CATSPEREQ5SY80 951 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-206ENST00000420746 ZDHHC20Q5W0Z9 365 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 KLHL10Q6JEL2 608 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 ACAD10Q6JQN1 1059 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 DPY19L2P1Q6NXN4 242 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 DNAJC24Q6P3W2 148 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 TUBA3EQ6PEY2 450 aa8.58□□□□□ -1.04
TRIM39-206ENST00000420746 TMEM220Q6QAJ8 160 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms