RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 CNPPD1Q9BV87 410 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 SDR39U1Q9NRG7 319 aaPredicted RBP11.47□□□□□ -0.57
DDR1-232ENST00000418800 SNTG1Q9NSN8 517 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 DNMT3BQ9UBC3 853 aaKnown RBP11.47□□□□□ -0.57
DDR1-232ENST00000418800 GJD2Q9UKL4 321 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 IKZF3Q9UKT9 509 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 XIRP2A4UGR9 3374 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 ANKRD31Q8N7Z5 1873 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 SNTNA6NMZ2 147 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 SSTR4P31391 388 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 CTSKP43235 329 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 ZNF135P52742 658 aaPredicted RBP11.47□□□□□ -0.57
DDR1-232ENST00000418800 IL2P60568 153 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 GPLD1P80108 840 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 SLAMF1Q13291 335 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 OR8H3Q8N146 312 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 GLB1L3Q8NCI6 653 aaPredicted RBP11.47□□□□□ -0.57
DDR1-232ENST00000418800 KCNC2Q96PR1 638 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 UCK2Q9BZX2 261 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 TMEM30AQ9NV96 361 aa11.47□□□□□ -0.57
DDR1-232ENST00000418800 TYW5A2RUC4 315 aaKnown RBP11.46□□□□□ -0.57
DDR1-232ENST00000418800 E9PAM4 449 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 M0QZ92 97 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 CBX4O00257 560 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 KMOO15229 486 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 PSIP1O75475 530 aaKnown RBP11.46□□□□□ -0.57
DDR1-232ENST00000418800 HOXA11P31270 313 aaPredicted RBP11.46□□□□□ -0.57
DDR1-232ENST00000418800 RFTN2Q52LD8 501 aaPredicted RBP11.46□□□□□ -0.57
DDR1-232ENST00000418800 CES5AQ6NT32 575 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 FAM131AQ6UXB0 335 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 DPY19L3Q6ZPD9 716 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 CYP4Z1Q86W10 505 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 OR6K2Q8NGY2 324 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 SMARCD1Q96GM5 515 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 MSANTD3Q96H12 275 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 IPPKQ9H8X2 491 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 PCDHA9Q9Y5H5 950 aa11.46□□□□□ -0.57
DDR1-232ENST00000418800 NUPL2O15504 423 aaKnown RBP11.46□□□□□ -0.58
DDR1-232ENST00000418800 MAFKO60675 156 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 YES1P07947 543 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 P2RX3P56373 397 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 POU6F2P78424 691 aaPredicted RBP11.46□□□□□ -0.58
DDR1-232ENST00000418800 BTBD16Q32M84 506 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 GET4Q7L5D6 327 aaPredicted RBP11.46□□□□□ -0.58
DDR1-232ENST00000418800 ZNF438Q7Z4V0 828 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 TLK2Q86UE8 772 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 NLGN4XQ8N0W4 816 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 GRPEL2Q8TAA5 225 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 ISL2Q96A47 359 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 FKBP10Q96AY3 582 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 TMEM209Q96SK2 561 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 NECTIN3Q9NQS3 549 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 CLCA3PQ9Y6N3 262 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 NRXN2Q9P2S2 1712 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 RAMP2O60895 175 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 ALX3O95076 343 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 GABARAPO95166 117 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 THP07101 528 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 PSKH1P11801 424 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 PCSK1P29120 753 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 EPHA2P29317 976 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 EEFSECP57772 596 aaKnown RBP11.46□□□□□ -0.58
DDR1-232ENST00000418800 RGMBQ6NW40 437 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 CYHR1Q6ZMK1 362 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 PAQR9Q6ZVX9 377 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 PHC2Q8IXK0 858 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 LIX1Q8N485 282 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 GALNT6Q8NCL4 622 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 SIPA1Q96FS4 1042 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 PCDHGA10Q9Y5H3 936 aa11.46□□□□□ -0.58
DDR1-232ENST00000418800 NRCAMQ92823 1304 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 PER2O15055 1255 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 B3GALT4O96024 378 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 SERPINF2P08697 491 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 S100A3P33764 101 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 MLLT3P42568 568 aaPredicted RBP11.45□□□□□ -0.58
DDR1-232ENST00000418800 POLD2P49005 469 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 MAPK12P53778 367 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 ERVK-8P63133 956 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 TUBA1BP68363 451 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 PPP2R2BQ00005 443 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 ALDH6A1Q02252 535 aaKnown RBP11.45□□□□□ -0.58
DDR1-232ENST00000418800 NFE2L1Q14494 772 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 PYDC2Q56P42 97 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 TUBA1AQ71U36 451 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 VTCN1Q7Z7D3 282 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 SPERTQ8NA61 448 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 ARRDC4Q8NCT1 418 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 KBTBD8Q8NFY9 601 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 SLC13A3Q8WWT9 602 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 GTF2H4Q92759 462 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 NTN4Q9HB63 628 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 C8orf4Q9NR00 106 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 GPR45Q9Y5Y3 372 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 QSER1Q2KHR3 1735 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 LZTS3O60299 673 aaPredicted RBP11.45□□□□□ -0.58
DDR1-232ENST00000418800 ACVRL1P37023 503 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 SLC9A3P48764 834 aa11.45□□□□□ -0.58
DDR1-232ENST00000418800 NKX3-2P78367 333 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms