RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RGS18Q9NS28 235 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 HECAQ9UBI9 543 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 MUTYHQ9UIF7 546 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 PCDHB5Q9Y5E4 795 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 PLXNA1Q9UIW2 1896 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC12A8A0AV02 714 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PPEF2O14830 753 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PMPCBO75439 489 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CREG1O75629 220 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CYP2A6P11509 494 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PRDX3P30048 256 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC9A3P48764 834 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CREMQ03060 361 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 HYAL2Q12891 473 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 KCTD2Q14681 263 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 LAPTM4AQ15012 233 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CARD16Q5EG05 197 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ANKS6Q68DC2 871 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 KCTD20Q7Z5Y7 419 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 SNX20Q7Z614 316 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 LDB1Q86U70 411 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 OSTM1Q86WC4 334 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CRYBG2Q8N1P7 616 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CDYL2Q8N8U2 506 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 POP5Q969H6 163 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 KIF12Q96FN5 646 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 MCCC1Q96RQ3 725 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CHCHD6Q9BRQ6 235 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ACAT2Q9BWD1 397 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC7A5P2Q9GIP4 190 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ATXN3LQ9H3M9 355 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 TFB2MQ9H5Q4 396 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 NIPAL2Q9H841 368 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 DYRK4Q9NR20 520 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 B3GNT2Q9NY97 397 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 EIF3KQ9UBQ5 218 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 KLHL21Q9UJP4 597 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF225Q9UK10 706 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 FBXW11Q9UKB1 542 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 TMPRSS11EQ9UL52 423 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 A0A0B4J293 547 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PLK4O00444 970 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ARHGEF15O94989 841 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 RPS17P08708 135 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PSKH1P11801 424 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 IFI30P13284 250 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF37AP17032 561 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 LAMA2P24043 3122 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 RGS6P49758 472 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PLIN5Q00G26 463 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 GPR162Q16538 588 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 RDH10Q8IZV5 341 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 FBXO39Q8N4B4 442 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF675Q8TD23 568 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 RNF31Q96EP0 1072 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 MRGPRX2Q96LB1 330 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 KCNS3Q9BQ31 491 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 C17orf62Q9BQA9 187 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC22A4Q9H015 551 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 TEKT2Q9UIF3 430 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PSORS1C1Q9UIG5 152 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF214Q9UL59 606 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 HCN4Q9Y3Q4 1203 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 KLK4Q9Y5K2 254 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 V9GYH0 126 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CCDC182A6NF36 153 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 STX7O15400 261 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 SERPINA1P01009 418 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF30P17039 623 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 IL32P24001 234 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 MYL9P24844 172 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CCNCP24863 283 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ARHGDIAP52565 204 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 TIAL1Q01085 375 aaKnown RBP eCLIP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 BAK1Q16611 211 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 AMHR2Q16671 573 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 DDR2Q16832 855 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM187BQ17R55 369 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CELF3Q5SZQ8 465 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM171BQ6P995 826 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 GET4Q7L5D6 327 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 AMIGO1Q86WK6 493 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 ENTHD1Q8IYW4 607 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 LRRC20Q8TCA0 184 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 BRSK1Q8TDC3 778 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 NCLNQ969V3 563 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PYURFQ96I23 114 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 PPP1R2P1Q96PQ5 205 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 TBCDQ9BTW9 1192 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 TRAF4Q9BUZ4 470 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 NFKBIZQ9BYH8 718 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 IPPQ9Y573 584 aa7.85□□□□□ -1.15
HMGXB4-202ENST00000418170 CD3EAPO15446 510 aaKnown RBP7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 KIAA0513O60268 411 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 KERAO60938 352 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 C1QBP02746 253 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 CDK1P06493 297 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms