RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 SIX3O95343 332 aaPredicted RBP13.56□□□□□ -0.24
LINC00940-201ENST00000418006 GPIP06744 558 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
LINC00940-201ENST00000418006 GPX3P22352 226 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 NR4A1P22736 598 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 SHMT2P34897 504 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 SELENBP1Q13228 472 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 DNASE1L3Q13609 305 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 CAPRIN1Q14444 709 aaKnown RBP13.56□□□□□ -0.24
LINC00940-201ENST00000418006 DHCR24Q15392 516 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 SF3B4Q15427 424 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00940-201ENST00000418006 PFKFB4Q16877 469 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 PGS1Q32NB8 556 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 SETMARQ53H47 684 aaPredicted RBP13.56□□□□□ -0.24
LINC00940-201ENST00000418006 TBPL2Q6SJ96 375 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 RFLNAQ6ZTI6 216 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 GET4Q7L5D6 327 aaPredicted RBP13.56□□□□□ -0.24
LINC00940-201ENST00000418006 METTL3Q86U44 580 aaKnown RBP13.56□□□□□ -0.24
LINC00940-201ENST00000418006 SERPINA9Q86WD7 417 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 C12orf40Q86WS4 652 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 ANKRD13BQ86YJ7 626 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 SGCDQ92629 289 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 NKX2-4Q9H2Z4 354 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 EML4Q9HC35 981 aaKnown RBP13.56□□□□□ -0.24
LINC00940-201ENST00000418006 IL26Q9NPH9 171 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 ANKMY1Q9P2S6 941 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 DPP7Q9UHL4 492 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 CD84Q9UIB8 345 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 NOX1Q9Y5S8 564 aa13.56□□□□□ -0.24
LINC00940-201ENST00000418006 GBF1Q92538 1859 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 FAM47E-STBD1D6RA91 191 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 INPP4BO15327 924 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 EIF2S1P05198 315 aaKnown RBP13.55□□□□□ -0.24
LINC00940-201ENST00000418006 MTHFD1P11586 935 aaKnown RBP13.55□□□□□ -0.24
LINC00940-201ENST00000418006 BPIP17213 487 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 RECQLP46063 649 aaPredicted RBP13.55□□□□□ -0.24
LINC00940-201ENST00000418006 CDH13P55290 713 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 CACNG1Q06432 222 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 MESP2Q0VG99 397 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 INAVAQ3KP66 663 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 LRRC66Q68CR7 880 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 PRMT9Q6P2P2 845 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 CRTC1Q6UUV9 634 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 LARP4Q71RC2 724 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00940-201ENST00000418006 RTL10Q7L3V2 364 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 DSG4Q86SJ6 1040 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 CELF5Q8N6W0 485 aaKnown RBP13.55□□□□□ -0.24
LINC00940-201ENST00000418006 VN1R2Q8NFZ6 395 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 EEF1AKMT1Q8WVE0 214 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 FKBP10Q96AY3 582 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 FUNDC2Q9BWH2 189 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 WARS2Q9UGM6 360 aaKnown RBP13.55□□□□□ -0.24
LINC00940-201ENST00000418006 TRMT6Q9UJA5 497 aaKnown RBP13.55□□□□□ -0.24
LINC00940-201ENST00000418006 IKZF3Q9UKT9 509 aa13.55□□□□□ -0.24
LINC00940-201ENST00000418006 NPEPPSL1A6NEC2 478 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 BBIP1A8MTZ0 92 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 SUPT3HB4E1H0 165 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 H0YAE9 185 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 CDC7O00311 574 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 BTN3A1O00481 513 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 VPS26AO75436 327 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 RSL1D1O76021 490 aaKnown RBP13.54□□□□□ -0.24
LINC00940-201ENST00000418006 WISP3O95389 354 aaPredicted RBP13.54□□□□□ -0.24
LINC00940-201ENST00000418006 POP4O95707 220 aaKnown RBP13.54□□□□□ -0.24
LINC00940-201ENST00000418006 ALBP02768 609 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 ALDOCP09972 364 aaKnown RBP13.54□□□□□ -0.24
LINC00940-201ENST00000418006 CSNK1DP48730 415 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 ATP4BP51164 291 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 STX1BP61266 288 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 ERVK-21P61565 698 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 RAD51Q06609 339 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 TSNQ15631 228 aaKnown RBP13.54□□□□□ -0.24
LINC00940-201ENST00000418006 INAQ16352 499 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 ZIK1Q3SY52 487 aaPredicted RBP13.54□□□□□ -0.24
LINC00940-201ENST00000418006 VPS26BQ4G0F5 336 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 CLEC6AQ6EIG7 209 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 CRTC3Q6UUV7 619 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 CYHR1Q6ZMK1 362 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 SLC16A12Q6ZSM3 486 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 MINDY1Q8N5J2 469 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 PTGR2Q8N8N7 351 aaPredicted RBP13.54□□□□□ -0.24
LINC00940-201ENST00000418006 PBX4Q9BYU1 374 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 TRIM8Q9BZR9 551 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 KLHL3Q9UH77 587 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 RNF112Q9ULX5 631 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 ERVW-1Q9UQF0 538 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 GLYATL1P3A0A0U1RQE8 302 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 A8MU76 341 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 FXYD1O00168 92 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 NDUFB5O43674 189 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 MT-ND1P03886 318 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 CYP17A1P05093 508 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 ADH5P11766 374 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 TCEA1P23193 301 aaKnown RBP13.54□□□□□ -0.24
LINC00940-201ENST00000418006 GSTM2P28161 218 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 NNMTP40261 264 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 TPTEP56180 551 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 CHRNA6Q15825 494 aa13.54□□□□□ -0.24
LINC00940-201ENST00000418006 KIF19Q2TAC6 998 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms