RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 STK39Q9UEW8 545 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF580Q9UK33 172 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZMYND8Q9ULU4 1186 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 FZD10Q9ULW2 581 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 HPCAL4Q9UM19 191 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 MAGED2Q9UNF1 606 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 R3HDM2Q9Y2K5 976 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 HEY1Q9Y5J3 304 aa3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 NYNRINQ9P2P1 1898 aaKnown RBP3.83□□□□□ -1.8
HMGB3P20-201ENST00000417997 DENND4CQ5VZ89 1909 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANAPC1Q9H1A4 1944 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CLUHO75153 1309 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCDC187A0A096LP49 1063 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 C3orf70A6NLC5 250 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC38A8A6NNN8 435 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CLCA1A8K7I4 914 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 HACD1B0YJ81 288 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 E7EVH7 732 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 KCNN4O15554 427 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MSI1O43347 362 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MFSD11O43934 449 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 NEBLO76041 1014 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CSPG5O95196 566 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CSH1P0DML2 217 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CSH2P0DML3 217 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SRGAP2BP0DMP2 458 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CBSLP0DN79 551 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC2A3P11169 496 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ALADP13716 330 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TFEBP19484 476 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MATN1P21941 496 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ITGB8P26012 769 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MST1P26927 711 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCKARP32238 428 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCKBRP32239 447 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCR1P32246 355 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC8A1P32418 973 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 OR1D2P34982 312 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CTNNB1P35222 781 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CBSP35520 551 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 HSPA9P38646 679 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 LMAN1P49257 510 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TUFMP49411 452 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRIM2P49643 509 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 HTR6P50406 440 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 PMS2P54278 862 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 DRG2P55039 364 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TBX4P57082 545 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 PITX1P78337 314 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 COG7P83436 770 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 B4GALNT1Q00973 533 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TAF10Q12962 218 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 XRCC4Q13426 336 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 OASLQ15646 514 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TAZQ16635 292 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRTGQ2VWP7 1150 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 C10orf120Q5SQS8 335 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 OTUD1Q5VV17 481 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SYPL2Q5VXT5 272 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ALS2CLQ60I27 953 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TPGS2Q68CL5 300 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 NCBP2-AS2Q69YL0 99 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 PM20D1Q6GTS8 502 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC8B1Q6J4K2 584 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 KIAA1161Q6NSJ0 714 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 RWDD4Q6NW29 188 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MSANTD2Q6P1R3 559 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF549Q6P9A3 640 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 LVRNQ6Q4G3 990 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 DHRS13Q6UX07 377 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 KYAT3Q6YP21 454 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 PPP1R21Q6ZMI0 780 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CYP4V2Q6ZWL3 525 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANKS1BQ7Z6G8 1248 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 HOOK3Q86VS8 718 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MON1AQ86VX9 555 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 VPS52Q8N1B4 723 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ELMOD1Q8N336 334 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MREGQ8N565 214 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATP6V0D2Q8N8Y2 350 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 OR52L2PQ8NGH6 319 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM71BQ8TC56 605 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 FBXO25Q8TCJ0 367 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TFB1MQ8WVM0 346 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 IGFBPL1Q8WX77 278 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CENPIQ92674 756 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAF2Q96CS3 445 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF689Q96CS4 500 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TBC1D31Q96DN5 1066 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 PGAP3Q96FM1 320 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SPATA17Q96L03 361 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZIM3Q96PE6 472 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 QKIQ96PU8 341 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CSPG4P5Q96PW8 444 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 GCNAQ96QF7 691 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMEM121Q9BTD3 319 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TTLL2Q9BWV7 592 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 KRTAP1-5Q9BYS1 174 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TKTL2Q9H0I9 626 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 TSPYL1Q9H0U9 437 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms