RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ZNF578Q96N58 590 aaPredicted RBP22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 OLFM1Q99784 485 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 ACTR10Q9NZ32 417 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 SEMA5BQ9P283 1151 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 PISDQ9UG56 409 aa22.38■■□□□ 1.17
SMARCB1-205ENST00000417137 A0A1W2PNU3 283 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 B4E171 279 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 GFYI3L273 518 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 RASGRF2O14827 1237 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 MAP3K7O43318 606 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 KIF1CO43896 1103 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 BRINP1O60477 761 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 ACSL3O95573 720 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 C8GP07360 202 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 ITGA2BP08514 1039 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 CHRM5P08912 532 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 PRDX3P30048 256 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 HSD17B2P37059 387 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 TSPAN7P41732 249 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 KPNA2P52292 529 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 KIR2DS3Q14952 304 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 TRMT10CQ7L0Y3 403 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 FAM129CQ86XR2 697 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 NKAPQ8N5F7 415 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 FBXO15Q8NCQ5 510 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 OR9A1PQ8NGU1 263 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 OR2L8Q8NGY9 312 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 KLHL6Q8WZ60 621 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 LINGO1Q96FE5 620 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 PRR11Q96HE9 360 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 MAP3K3Q99759 626 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 FUT8Q9BYC5 575 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 ACSS3Q9H6R3 686 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 POPDC3Q9HBV1 291 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 C1GALT1Q9NS00 363 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 THSD1Q9NS62 852 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 SPATA7Q9P0W8 599 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 POMT2Q9UKY4 750 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 MTO1Q9Y2Z2 717 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 CEP295Q9C0D2 2601 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 CFAP47Q6ZTR5 3102 aa22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 COL27A1Q8IZC6 1860 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-205ENST00000417137 SPEGQ15772 3267 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 ZNF839A8K0R7 811 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 EFCAB7A8K855 629 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 ARHGEF33A8MVX0 844 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 SLC16A5O15375 505 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 HGFP14210 728 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 CDH3P22223 829 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 SEPHS1P49903 392 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 TAS2R39P59534 338 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 ERVPABLB-1P60509 514 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 PPP1CAP62136 330 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 GRB7Q14451 532 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 USP10Q14694 798 aaKnown RBP22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 ANKS6Q68DC2 871 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 CYB5D1Q6P9G0 228 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 UBE2R2Q712K3 238 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 PIWIL4Q7Z3Z4 852 aaKnown RBP22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 MDM1Q8TC05 714 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 MCOLN3Q8TDD5 553 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 GPR22Q99680 433 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 B3GNT4Q9C0J1 378 aa22.36■■□□□ 1.17
SMARCB1-205ENST00000417137 A0A087WUV0 522 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 ISM1B1AKI9 464 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 ZBTB11O95625 1053 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 FGF3P11487 239 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 CCL4P13236 92 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 NELFEP18615 380 aaKnown RBP22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 ITIH1P19827 911 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 CYP2A7P20853 494 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 TNFRSF8P28908 595 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 MAPK10P53779 464 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 PMS2P54278 862 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 SP140Q13342 867 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 ARHGAP19Q14CB8 494 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 PDLIM5Q96HC4 596 aaKnown RBP22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 TAAR9Q96RI9 348 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 NRTNQ99748 197 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 OCIAD1Q9NX40 245 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 SLC39A1Q9NY26 324 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 CIDEBQ9UHD4 219 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 PCDHGA7Q9Y5G6 932 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 IKBKGQ9Y6K9 419 aa22.35■■□□□ 1.17
SMARCB1-205ENST00000417137 IGHV5-51A0A0C4DH38 117 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 PABPN1LA6NDY0 278 aaKnown RBP22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 MYO1CO00159 1063 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 STMN1P16949 149 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 RAB15P59190 212 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 HSD11B2P80365 405 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 MC2RQ01718 297 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 TBC1D25Q3MII6 688 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 CCSMST1Q4G0I0 132 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 TMTC4Q5T4D3 741 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 SPESP1Q6UW49 350 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 HMGCLL1Q8TB92 370 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 ANKRD7Q92527 254 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 FGF11Q92914 225 aa22.34■■□□□ 1.17
SMARCB1-205ENST00000417137 SLC41A2Q96JW4 573 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms