RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FOXL2P58012 376 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 HSPA14Q0VDF9 509 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 KCNJ11Q14654 390 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 TRIP13Q15645 432 aaPredicted RBP14.58□□□□□ -0.08
UBXN4-203ENST00000416538 FASTKD1Q53R41 847 aaKnown RBP14.58□□□□□ -0.08
UBXN4-203ENST00000416538 PCID2Q5JVF3 399 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 CTSL3PQ5NE16 218 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 LYPLAL1Q5VWZ2 237 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 ANKRD22Q5VYY1 191 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 SYVN1Q86TM6 617 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 TAX1BP1Q86VP1 789 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 APLFQ8IW19 511 aaPredicted RBP14.58□□□□□ -0.08
UBXN4-203ENST00000416538 MPP5Q8N3R9 675 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 CPT1BQ92523 772 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 CLIP3Q96DZ5 547 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 MFSD3Q96ES6 412 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 GPR87Q9BY21 358 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 FANCEQ9HB96 536 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 FARSAQ9Y285 508 aaKnown RBP14.58□□□□□ -0.08
UBXN4-203ENST00000416538 PPP2R2CQ9Y2T4 447 aa14.58□□□□□ -0.08
UBXN4-203ENST00000416538 A0A0J9YY10 115 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 GOLGA8KD6RF30 607 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 GOLGA8TH3BQL2 631 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 PRMT5O14744 637 aaPredicted RBP14.57□□□□□ -0.08
UBXN4-203ENST00000416538 CD3EAPO15446 510 aaKnown RBP14.57□□□□□ -0.08
UBXN4-203ENST00000416538 ZNF749O43361 778 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 CEP104O60308 925 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 CNOT3O75175 753 aaKnown RBP14.57□□□□□ -0.08
UBXN4-203ENST00000416538 CYP2A7P20853 494 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 AOAHP28039 575 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 BDKRB1P46663 353 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 VPS41P49754 854 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 KCNC4Q03721 635 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 CCSMST1Q4G0I0 132 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 ZNF449Q6P9G9 518 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 NLRP9Q7RTR0 991 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 C2orf73Q8N5S3 287 aaPredicted RBP14.57□□□□□ -0.08
UBXN4-203ENST00000416538 UBE2Q2Q8WVN8 375 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 CARD6Q9BX69 1037 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 SPRTNQ9H040 489 aaPredicted RBP14.57□□□□□ -0.08
UBXN4-203ENST00000416538 OR6C2Q9NZP2 312 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 ANAPC2Q9UJX6 822 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 ZKSCAN5Q9Y2L8 839 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 NFS1Q9Y697 457 aa14.57□□□□□ -0.08
UBXN4-203ENST00000416538 LRRK2Q5S007 2527 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 ARGFXA6NJG6 315 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 NRP2O60462 931 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 AVILO75366 819 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 SLCO2B1O94956 709 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 RAB40ALP0C0E4 278 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 CBSLP0DN79 551 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 TPSB2P20231 275 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 MAGP20916 626 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 CBSP35520 551 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 GCGRP47871 477 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 RPS15P62841 145 aaKnown RBP14.56□□□□□ -0.08
UBXN4-203ENST00000416538 NCF4Q15080 339 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 TPSAB1Q15661 275 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 IGFBP7Q16270 282 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 KYNUQ16719 465 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 DNAJC21Q5F1R6 531 aaKnown RBP14.56□□□□□ -0.08
UBXN4-203ENST00000416538 TCTN3Q6NUS6 607 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 AGGF1Q8N302 714 aaeCLIP14.56□□□□□ -0.08
UBXN4-203ENST00000416538 EFCAB3Q8N7B9 438 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 TRIM58Q8NG06 486 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 CFAP61Q8NHU2 1237 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 BIRC8Q96P09 236 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 KIFC1Q9BW19 673 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 NLNQ9BYT8 704 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 IL22Q9GZX6 179 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 SYTL2Q9HCH5 934 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 IL1RAPL1Q9NZN1 696 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 POLG2Q9UHN1 485 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 TCFL5Q9UL49 500 aa14.56□□□□□ -0.08
UBXN4-203ENST00000416538 USP9XQ93008 2570 aaPredicted RBP14.55□□□□□ -0.08
UBXN4-203ENST00000416538 E7EQ34 232 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 MKRN2OSH3BPM6 223 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 NIPSNAP2O75323 286 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 KLK3P07288 261 aaPredicted RBP14.55□□□□□ -0.08
UBXN4-203ENST00000416538 ITGAXP20702 1163 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 RPS3P23396 243 aaKnown RBP eCLIP14.55□□□□□ -0.08
UBXN4-203ENST00000416538 MAGEA6P43360 314 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 TTPAP49638 278 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 RAB28P51157 221 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 EIF3BP55884 814 aaKnown RBP14.55□□□□□ -0.08
UBXN4-203ENST00000416538 SLC5A12Q1EHB4 618 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 TYSND1Q2T9J0 566 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 AARS2Q5JTZ9 985 aaKnown RBP14.55□□□□□ -0.08
UBXN4-203ENST00000416538 LRRC8BQ6P9F7 803 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 GSTA5Q7RTV2 222 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 CAND1Q86VP6 1230 aaKnown RBP14.55□□□□□ -0.08
UBXN4-203ENST00000416538 DCUN1D3Q8IWE4 304 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 DNAJC22Q8N4W6 341 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 ZBTB2Q8N680 514 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 DENND1AQ8TEH3 1009 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 LPGAT1Q92604 370 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 MS4A14Q96JA4 679 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 GBP5Q96PP8 586 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 CHRNA10Q9GZZ6 450 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 MRM3Q9HC36 420 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms