RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 SNX6Q9UNH7 406 aa17.78■□□□□ 0.44
MSI2-203ENST00000416426 EIF3LQ9Y262 564 aaKnown RBP17.78■□□□□ 0.44
MSI2-203ENST00000416426 FADS3Q9Y5Q0 445 aa17.78■□□□□ 0.44
MSI2-203ENST00000416426 TCRBV3S1A0A5B6 114 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 K7ESM1 405 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 LZTS3O60299 673 aaPredicted RBP17.77■□□□□ 0.44
MSI2-203ENST00000416426 CATP04040 527 aaKnown RBP17.77■□□□□ 0.44
MSI2-203ENST00000416426 PRPH2P23942 346 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 GPR1P46091 355 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 RPL38P63173 70 aaKnown RBP17.77■□□□□ 0.44
MSI2-203ENST00000416426 RHDQ02161 417 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 PCDH1Q08174 1060 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 ABRQ12979 859 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 OGFRL1Q5TC84 451 aaPredicted RBP17.77■□□□□ 0.44
MSI2-203ENST00000416426 IRAK1BP1Q5VVH5 260 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 IZUMO2Q6UXV1 221 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 PRR23BQ6ZRT6 265 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 LILRA3Q8N6C8 439 aaPredicted RBP17.77■□□□□ 0.44
MSI2-203ENST00000416426 FBXO15Q8NCQ5 510 aaPredicted RBP17.77■□□□□ 0.44
MSI2-203ENST00000416426 ZUFSPQ96AP4 578 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 TMEM125Q96AQ2 219 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 LINC00615Q96LM1 132 aaPredicted RBP17.77■□□□□ 0.44
MSI2-203ENST00000416426 CCDC138Q96M89 665 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 TRIM39Q9HCM9 518 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 GULP1Q9UBP9 304 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 RIMS3Q9UJD0 308 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 SLC22A14Q9Y267 594 aa17.77■□□□□ 0.44
MSI2-203ENST00000416426 LAMA3Q16787 3333 aa17.77■□□□□ 0.43
MSI2-203ENST00000416426 ANTXRLA6NF34 631 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 LIN7AO14910 233 aaPredicted RBP17.76■□□□□ 0.43
MSI2-203ENST00000416426 UGDHO60701 494 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 PRAMEF4O60810 478 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 PDYNP01213 254 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 CAPNS1P04632 268 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 EPHX1P07099 455 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 MAP4P27816 1152 aaKnown RBP17.76■□□□□ 0.43
MSI2-203ENST00000416426 PREPP48147 710 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 CCR3P51677 355 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 HMGCS1Q01581 520 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 CNTN1Q12860 1018 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 ADGRE1Q14246 886 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 CAPRIN1Q14444 709 aaKnown RBP17.76■□□□□ 0.43
MSI2-203ENST00000416426 MAP7D1Q3KQU3 841 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 TIGD2Q4W5G0 525 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 ATAT1Q5SQI0 421 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 PRAMEF9Q5VWM5 478 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 FAM46CQ5VWP2 391 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 LPCAT4Q643R3 524 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 RAET1GQ6H3X3 334 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 XKR5Q6UX68 686 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 SPATA24Q86W54 205 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 PYCR2Q96C36 320 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 ZNF514Q96K75 400 aaPredicted RBP17.76■□□□□ 0.43
MSI2-203ENST00000416426 KXD1Q9BQD3 176 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 ACPTQ9BZG2 426 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 KLHL4Q9C0H6 718 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 C1orf109Q9NX04 203 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 ZNHIT2Q9UHR6 403 aa17.76■□□□□ 0.43
MSI2-203ENST00000416426 NPC1O15118 1278 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 VEGFDO43915 354 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 RSL1D1O76021 490 aaKnown RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 APODP05090 189 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 VARSP26640 1264 aaKnown RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 PEX2P28328 305 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 ZNF33BQ06732 778 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 BNIP2Q12982 314 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 TRIP10Q15642 601 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 CPSF6Q16630 551 aaKnown RBP eCLIP17.75■□□□□ 0.43
MSI2-203ENST00000416426 IMPG1Q17R60 797 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 ITPRIPL2Q3MIP1 535 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 PIP5KL1Q5T9C9 394 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 PDSS2Q86YH6 399 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 CXorf40AQ8TE69 158 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 ATG10Q9H0Y0 220 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 S1PR5Q9H228 398 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 STOX2Q9P2F5 926 aaPredicted RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 GMPR2Q9P2T1 348 aaKnown RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 STON1Q9Y6Q2 735 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 C15orf38-AP3S2A0A0A6YYH1 394 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 A0A1W2PPC1 479 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 KRT87PA6NCN2 255 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 SOX1O00570 391 aaPredicted RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 LAMP2P13473 410 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 GDI1P31150 447 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 ATXN3P54252 364 aaPredicted RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 EEFSECP57772 596 aaKnown RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 YBX1P67809 324 aaKnown RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 ADAM15Q13444 863 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 SGO1Q5FBB7 561 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 LIPJQ5W064 366 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 ARPINQ7Z6K5 226 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 TRIM74Q86UV6 250 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 DHFR2Q86XF0 187 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 GLB1L3Q8NCI6 653 aaPredicted RBP17.75■□□□□ 0.43
MSI2-203ENST00000416426 SELENOMQ8WWX9 145 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 OR2AG1Q9H205 316 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 ATXN10Q9UBB4 475 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 FAM8A1Q9UBU6 413 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 GPR34Q9UPC5 381 aa17.75■□□□□ 0.43
MSI2-203ENST00000416426 CKAP5Q14008 2032 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms