RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 VARS2Q5ST30 1063 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 ZBTB37Q5TC79 503 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 ARHGAP17Q68EM7 881 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 TIGD7Q6NT04 549 aaPredicted RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 SLC38A4Q969I6 547 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 CSPG4P5Q96PW8 444 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 FYTTD1Q96QD9 318 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 TMEM209Q96SK2 561 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 MAGEB5Q9BZ81 275 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 CRTAC1Q9NQ79 661 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 RBM22Q9NW64 420 aaKnown RBP eCLIP7.68□□□□□ -1.18
SIK3-203ENST00000415541 TRPM5Q9NZQ8 1165 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 TMEM5Q9Y2B1 443 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 CSNK1G3Q9Y6M4 447 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 DOCK1Q14185 1865 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 SDK1Q7Z5N4 2213 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 WDR27A2RRH5 827 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 ZNF98A6NK75 572 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 G3V2T6 193 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 RPS17P08708 135 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 MLNP12872 115 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 CCL5P13501 91 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 WARSP23381 471 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 MYL9P24844 172 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 AKR1D1P51857 326 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 ERVK-21P61565 698 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 NKX3-2P78367 333 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 TEKQ02763 1124 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 CD47Q08722 323 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 RUNDC3AQ59EK9 446 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 Q5BKY6 102 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 NXNL2Q5VZ03 156 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 PM20D1Q6GTS8 502 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 STX19Q8N4C7 294 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 EXT2Q93063 718 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 NSMCE2Q96MF7 247 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 UROC1Q96N76 676 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 QKIQ96PU8 341 aaKnown RBP eCLIP7.68□□□□□ -1.182e-7■■■■■ 27.2
SIK3-203ENST00000415541 RBM4BQ9BQ04 359 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 SLC30A2Q9BRI3 323 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 TRAF4Q9BUZ4 470 aaPredicted RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 RBM4Q9BWF3 364 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 GTPBP2Q9BX10 602 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 TLR8Q9NR97 1041 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 ZNF358Q9NW07 568 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 ZNF639Q9UID6 485 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 TSR3Q9UJK0 312 aaKnown RBP7.68□□□□□ -1.18
SIK3-203ENST00000415541 MKL2Q9ULH7 1088 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 SNX6Q9UNH7 406 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 PCDHGB3Q9Y5G1 929 aa7.68□□□□□ -1.18
SIK3-203ENST00000415541 A0A1W2PQH9 124 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 HAS3O00219 553 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 SDHDO14521 159 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 TLL1O43897 1013 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 TULP3O75386 442 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 PCMT1P22061 227 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 IGFBP6P24592 240 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 FOXM1Q08050 763 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 TAF10Q12962 218 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 PLD1Q13393 1074 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 TRIP4Q15650 581 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 SETMARQ53H47 684 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 HABP4Q5JVS0 413 aaKnown RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 STEAP4Q687X5 459 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 GLYATQ6IB77 296 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 CMC1Q7Z7K0 106 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 SYVN1Q86TM6 617 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 COMMD7Q86VX2 200 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 EID3Q8N140 333 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 MINDY1Q8N5J2 469 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 EFHBQ8N7U6 833 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 GLB1L3Q8NCI6 653 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 PCDH19Q8TAB3 1148 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 RPL3LQ92901 407 aaKnown RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 HYLS1Q96M11 299 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 GDF15Q99988 308 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ACBD6Q9BR61 282 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 PRRG3Q9BZD7 231 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 CLEC4MQ9H2X3 399 aaPredicted RBP7.67□□□□□ -1.18
SIK3-203ENST00000415541 NT5MQ9NPB1 228 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ABCC13Q9NSE7 274 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 NAALAD2Q9Y3Q0 740 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 LOXHD1Q8IVV2 1947 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 A0A0B4J203 849 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 NR5A2O00482 541 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 NPHS1O60500 1241 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 GMDSO60547 372 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 LRIG2O94898 1065 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 CDK14O94921 469 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 TBX18O95935 607 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ITGB1P05556 798 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 PROS1P07225 676 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 SLC2A3P11169 496 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 COL6A1P12109 1028 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ATP4BP51164 291 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 DAOAP59103 153 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 MAB21L1Q13394 359 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 ZNF470Q6ECI4 717 aa7.67□□□□□ -1.18
SIK3-203ENST00000415541 FUT10Q6P4F1 479 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms