RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 A0A1B0GVM2 712 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SLC38A8A6NNN8 435 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 ZNF99A8MXY4 864 aaPredicted RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 CLDN25C9JDP6 229 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SEPT4O43236 478 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 FZD6O60353 706 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 MRPS14O60783 128 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 ADAMTS4O75173 837 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 ULK1O75385 1050 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 PRKD3O94806 890 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 BMP4P12644 408 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 PFKLP17858 780 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 CD6P30203 668 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 DCTP40126 519 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 RPL38P63173 70 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 FAM174BQ3ZCQ3 159 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 GTDC1Q4AE62 458 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 INO80DQ53TQ3 878 aaPredicted RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 CATSPEREQ5SY80 951 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 LRIF1Q5T3J3 769 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 PTRHD1Q6GMV3 140 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 DNAJC14Q6Y2X3 702 aaPredicted RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 NEK10Q6ZWH5 1172 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 DCP2Q8IU60 420 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 ELMOD1Q8N336 334 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 MINDY2Q8NBR6 621 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SETD9Q8NE22 299 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 HPS1Q92902 700 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 CCDC97Q96F63 343 aaPredicted RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 EXOC2Q96KP1 924 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SEPT5Q99719 369 aaPredicted RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 TBCDQ9BTW9 1192 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 WDR12Q9GZL7 423 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 CLPBQ9H078 707 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 KCNH6Q9H252 994 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 EPS8L2Q9H6S3 715 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 KAT8Q9H7Z6 458 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 RDH14Q9HBH5 336 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 HMG20AQ9NP66 347 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SLC6A13Q9NSD5 602 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 VNN3Q9NY84 501 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SLC25A37Q9NYZ2 338 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 MAN2B2Q9Y2E5 1009 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 PRG3Q9Y2Y8 225 aaPredicted RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 ANGPTL3Q9Y5C1 460 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 U3KQV3 271 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 TTC36A6NLP5 189 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 H7C4K7 107 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SLC1A7O00341 560 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 NDUFS2O75306 463 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 B3GALT4O96024 378 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 PIK3CGP48736 1102 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 GZMMP51124 257 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 HUNKP57058 714 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 CXCR4P61073 352 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 VBP1P61758 197 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 TRIM32Q13049 653 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 KCNA10Q16322 511 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 USP39Q53GS9 565 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 CDKL4Q5MAI5 379 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 RNF19BQ6ZMZ0 732 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SLCO6A1Q86UG4 719 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 MSRB3Q8IXL7 192 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 MFSD4AQ8N468 514 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 LIX1Q8N485 282 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 EFHBQ8N7U6 833 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 ARL10Q8N8L6 244 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 USP7Q93009 1102 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 PYURFQ96I23 114 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 SLC29A3Q9BZD2 475 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 CCDC90BQ9GZT6 254 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 GABARAPL1Q9H0R8 117 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 LRTM1Q9HBL6 345 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 NECTIN3Q9NQS3 549 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 MTRRQ9UBK8 725 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 OPTCQ9UBM4 332 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 ZMYM5Q9UJ78 669 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 ERVW-1Q9UQF0 538 aa9.58□□□□□ -0.88
CD44-206ENST00000415148 FNDC3AQ9Y2H6 1198 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 FAM32AQ9Y421 112 aaKnown RBP9.58□□□□□ -0.88
CD44-206ENST00000415148 A0A096LPI6 279 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 IQCF5A8MTL0 148 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 CBX4O00257 560 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 SLC22A1O15245 554 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 HS6ST1O60243 411 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 TSPAN3O60637 253 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 SEC22BO75396 215 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 CELF2O95319 508 aaKnown RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 VNN2O95498 520 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 JUNDP17535 347 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 TGM1P22735 817 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 HSPA7P48741 367 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 TMED10P49755 219 aaKnown RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 ARPP19P56211 112 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 RPS24P62847 133 aaKnown RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 EMX1Q04741 257 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 CDK5R2Q13319 367 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 PTGR1Q14914 329 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 MAPK11Q15759 364 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 SPANXN4Q5MJ08 99 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms