RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HMGN2P46Q86SG4 172 aa18.16■□□□□ 0.5
SHANK3-202ENST00000414786 BARD1Q99728 777 aaKnown RBP18.16■□□□□ 0.5
SHANK3-202ENST00000414786 CCNB1IP1Q9NPC3 277 aa18.16■□□□□ 0.5
SHANK3-202ENST00000414786 C14orf105Q9NVL8 296 aa18.16■□□□□ 0.5
SHANK3-202ENST00000414786 M0R2N6 131 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 OR4F21O95013 312 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 BLKP51451 505 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 KCNJ2P63252 427 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 TMEM161BQ8NDZ6 487 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■■■□□ 17.8
SHANK3-202ENST00000414786 AP3M1Q9Y2T2 418 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 CLUHO75153 1309 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 ZFP69Q49AA0 526 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 MTFR2Q6P444 385 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 VASH1Q7L8A9 365 aaPredicted RBP18.15■□□□□ 0.5
SHANK3-202ENST00000414786 GPALPP1Q8IXQ4 340 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 FAM47BQ8NA70 645 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 IL31RAQ8NI17 732 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 RASSF5Q8WWW0 418 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 CCNKO75909 580 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 TAS2R40P59535 323 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 ABHD13Q7L211 337 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 RELL1Q8IUW5 271 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 LRRN4CLQ8ND94 238 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 KCTD15Q96SI1 283 aaPredicted RBP18.15■□□□□ 0.5
SHANK3-202ENST00000414786 GDF3Q9NR23 364 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 CUEDC1Q9NWM3 386 aaPredicted RBP18.15■□□□□ 0.5
SHANK3-202ENST00000414786 RPS9P46781 194 aaKnown RBP18.15■□□□□ 0.5
SHANK3-202ENST00000414786 NSMCE3Q96MG7 304 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 KCNC2Q96PR1 638 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 TMEM121BQ9BXQ6 578 aaPredicted RBP18.15■□□□□ 0.5
SHANK3-202ENST00000414786 CYP8B1Q9UNU6 501 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 POLR1AO95602 1720 aaPredicted RBP18.15■□□□□ 0.5
SHANK3-202ENST00000414786 GNB3P16520 340 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 FMO3P31513 532 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 GAD2Q05329 585 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 CACNG1Q06432 222 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 MAD2L1BPQ15013 274 aaPredicted RBP18.15■□□□□ 0.5
SHANK3-202ENST00000414786 TAS1R3Q7RTX0 852 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 ZC3H10Q96K80 434 aaKnown RBP18.15■□□□□ 0.5
SHANK3-202ENST00000414786 CLDN11O75508 207 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 CREB5Q02930 508 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 CPNE9Q8IYJ1 553 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 BTN2A3PQ96KV6 586 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 HAO2Q9NYQ3 351 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 SLC17A7Q9P2U7 560 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 FKBPLQ9UIM3 349 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 WASF3Q9UPY6 502 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 BAIAP2Q9UQB8 552 aa18.15■□□□□ 0.5
SHANK3-202ENST00000414786 BTBD19C9JJ37 291 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 J3QLW9 94 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 ALPIP09923 528 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 ZNF19P17023 458 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 GADD45AP24522 165 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 PRKCZQ05513 592 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 SMYD5Q6GMV2 418 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 ZNF554Q86TJ5 538 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 AMZ2Q86W34 360 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 STK32AQ8WU08 396 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 IL21RQ9HBE5 538 aa18.14■□□□□ 0.5
SHANK3-202ENST00000414786 MKKSQ9NPJ1 570 aaPredicted RBP18.14■□□□□ 0.5
SHANK3-202ENST00000414786 MYEF2Q9P2K5 600 aaKnown RBP18.14■□□□□ 0.5
SHANK3-202ENST00000414786 PKMP14618 531 aaKnown RBP18.14■□□□□ 0.49
SHANK3-202ENST00000414786 MAP4K3Q8IVH8 894 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 CD300LFQ8TDQ1 290 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 FN3KQ9H479 309 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 ERVK-5Q9HDB9 667 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 KBTBD4Q9NVX7 518 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 MIOSQ9NXC5 875 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 MFSD11O43934 449 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 GADD45GO95257 159 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 MATKP42679 507 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 ENAMQ9NRM1 1142 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 FBXL12Q9NXK8 326 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 MLXQ9UH92 298 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 A0A0U1RQJ8 604 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 PRMT5O14744 637 aaPredicted RBP18.14■□□□□ 0.49
SHANK3-202ENST00000414786 GCNT1Q02742 428 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 EFR3AQ14156 821 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 LCN1P1Q5VSP4 162 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 PRPF38BQ5VTL8 546 aaKnown RBP18.14■□□□□ 0.49
SHANK3-202ENST00000414786 C3orf33Q6P1S2 294 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 GSTCDQ8NEC7 633 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 CORO1CQ9ULV4 474 aaPredicted RBP18.14■□□□□ 0.49
SHANK3-202ENST00000414786 KCNK6Q9Y257 313 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 ATP5A1P25705 553 aaKnown RBP18.14■□□□□ 0.49
SHANK3-202ENST00000414786 UNC93AQ86WB7 457 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 GNG8Q9UK08 70 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 RAP2CQ9Y3L5 183 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 LAMC1P11047 1609 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 LSM1O15116 133 aaKnown RBP18.14■□□□□ 0.49
SHANK3-202ENST00000414786 STK16O75716 305 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 UNC5CO95185 931 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 SYNGR4O95473 234 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 ZNF41P51814 821 aaPredicted RBP18.14■□□□□ 0.49
SHANK3-202ENST00000414786 FPGSQ05932 587 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 TUSC3Q13454 348 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 ZNF542PQ5EBM4 170 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 SH3RF2Q8TEC5 729 aa18.14■□□□□ 0.49
SHANK3-202ENST00000414786 APBB2Q92870 758 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms