RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SRP54P61011 504 aaKnown RBP15.15■□□□□ 0.02
SHMT2-202ENST00000414700 RACK1P63244 317 aaKnown RBP15.15■□□□□ 0.02
SHMT2-202ENST00000414700 CHI3L2Q15782 390 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 LIN52Q52LA3 116 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 MBOAT1Q6ZNC8 495 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 BMP8AQ7Z5Y6 402 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 HID1Q8IV36 788 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 DNASE2BQ8WZ79 361 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 KLHDC7BQ96G42 594 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 OSGEPL1Q9H4B0 414 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 ZNF395Q9H8N7 513 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-202ENST00000414700 RMI1Q9H9A7 625 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 DNAAF2Q9NVR5 837 aaKnown RBP15.15■□□□□ 0.02
SHMT2-202ENST00000414700 CIDEBQ9UHD4 219 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 MATN4O95460 622 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 GUCA1CO95843 209 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 AK4P27144 223 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 EIF2B5Q13144 721 aaKnown RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 TGFBIQ15582 683 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 METRNLQ641Q3 311 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 ATG14Q6ZNE5 492 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 RPS27LQ71UM5 84 aaKnown RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 GAB3Q8WWW8 586 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 ASB11Q8WXH4 323 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 NSL1Q96IY1 281 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 OR2M4Q96R27 311 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 OR52A5Q9H2C5 316 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 NPHS2Q9NP85 383 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 OXSMQ9NWU1 459 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 WDR37Q9Y2I8 494 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 CFAP20Q9Y6A4 193 aaKnown RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 LRRC14BA6NHZ5 514 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 PRR19A6NJB7 356 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 SUPT3HB4E1H0 165 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 EIF3FO00303 357 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 SUPT3HO75486 399 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 ARRB2P32121 409 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 CSNK1EP49674 416 aaKnown RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 PFKFB4Q16877 469 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 C18orf21Q32NC0 220 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 CCSMST1Q4G0I0 132 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 LPCAT2Q7L5N7 544 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 ADAMTSL2Q86TH1 951 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 GPSM1Q86YR5 675 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 ARHGAP24Q8N264 748 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 MFSD2AQ8NA29 543 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 RDH11Q8TC12 318 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 ZNF75CPQ92670 426 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 ESAMQ96AP7 390 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 C20orf27Q9GZN8 174 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 TMEM74BQ9NUR3 256 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 ARL8BQ9NVJ2 186 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 FBXO4Q9UKT5 387 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 PDE10AQ9Y233 779 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 GMEB1Q9Y692 573 aa15.14■□□□□ 0.01
SHMT2-202ENST00000414700 DNMT3AQ9Y6K1 912 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-202ENST00000414700 TMEM131Q92545 1883 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 GFYI3L273 518 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 TNFRSF10CO14798 259 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 BIRC5O15392 142 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 RASGRP1O95267 797 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 SIX3O95343 332 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-202ENST00000414700 MPC1LP0DKB6 136 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 ATP5F1P24539 256 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-202ENST00000414700 DHPSP49366 369 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-202ENST00000414700 CTBSQ01459 385 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 PRAMEF14Q5SWL7 426 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 PMS2CLQ68D20 193 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 UBE2R2Q712K3 238 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-202ENST00000414700 TIMM29Q9BSF4 260 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 MANSC1Q9H8J5 431 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 ASB1Q9Y576 335 aa15.13■□□□□ 0.01
SHMT2-202ENST00000414700 TOR1BO14657 336 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 IPO13O94829 963 aaKnown RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 EML2O95834 649 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 CELA2BP08218 269 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 ACADLP28330 430 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 CCR10P46092 362 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 AGTR2P50052 363 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 NAGLUP54802 743 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 DMPKQ09013 629 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 BST1Q10588 318 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 PTK2BQ14289 1009 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 PLK5Q496M5 336 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 NEK10Q6ZWH5 1172 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 FRA10AC1Q70Z53 315 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 RASGRP3Q8IV61 690 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 ST13P4Q8IZP2 240 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 WDR60Q8WVS4 1066 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 LZICQ8WZA0 190 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 NELL1Q92832 810 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 DPEP2Q9H4A9 486 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 NCKIPSDQ9NZQ3 722 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 GPR179Q6PRD1 2367 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 ARHGEF33A8MVX0 844 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 TLR4O00206 839 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 BCAT2O15382 392 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 FFAR2O15552 330 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 TRIM13O60858 407 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms