RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 IKZF3Q9UKT9 509 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 POMT2Q9UKY4 750 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 LOXL2Q9Y4K0 774 aa13.52□□□□□ -0.25
CPNE1-206ENST00000412056 PIPSLA2A3N6 862 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 TLCD2A6NGC4 264 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 GFYI3L273 518 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 RASGRF2O14827 1237 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 HGSO14964 777 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-206ENST00000412056 KDM1AO60341 852 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 RASSF9O75901 435 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 WISP3O95389 354 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-206ENST00000412056 ANKRD34CP0C6C1 535 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 ITIH1P19827 911 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 PEBP1P30086 187 aaKnown RBP13.51□□□□□ -0.25
CPNE1-206ENST00000412056 GMPRP36959 345 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 ETV5P41161 510 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 SEPHS1P49903 392 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 RAB28P51157 221 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 IL2P60568 153 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 FOXK2Q01167 660 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 PRKAA1Q13131 559 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 RTP5Q14D33 572 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 CACHD1Q5VU97 1274 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 FBXO38Q6PIJ6 1188 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 UBE2R2Q712K3 238 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-206ENST00000412056 PRSS42Q7Z5A4 293 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 C2orf73Q8N5S3 287 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-206ENST00000412056 LINC01555Q8NAE3 123 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 OR2L8Q8NGY9 312 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 MAGEC3Q8TD91 643 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 DENND1AQ8TEH3 1009 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 ANKRD49Q8WVL7 239 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 SLC44A1Q8WWI5 657 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 DLG3Q92796 817 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 NXPE2Q96DL1 559 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 PRR11Q96HE9 360 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-206ENST00000412056 PAFAH2Q99487 392 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 POPDC3Q9HBV1 291 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 GPAMQ9HCL2 828 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 OR6C2Q9NZP2 312 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 ADAMTS6Q9UKP5 1117 aa13.51□□□□□ -0.25
CPNE1-206ENST00000412056 IGHV5-51A0A0C4DH38 117 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 HMX2A2RU54 273 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 C2orf74A8MZ97 194 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 C1QTNF9BB2RNN3 333 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 POC1B-GALNT4F8VUJ3 575 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 MYO1CO00159 1063 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 PLD2O14939 933 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 SYF2O95926 243 aaKnown RBP13.5□□□□□ -0.25
CPNE1-206ENST00000412056 C1QTNF9P0C862 333 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 SPTBP11277 2137 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 CCL4P13236 92 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 UGT2B7P16662 529 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 STMN1P16949 149 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 CSTF2P33240 577 aaKnown RBP eCLIP13.5□□□□□ -0.252e-45■■■■■ 66.1
CPNE1-206ENST00000412056 LSSP48449 732 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 SP140Q13342 867 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 EIF3IQ13347 325 aaKnown RBP13.5□□□□□ -0.25
CPNE1-206ENST00000412056 ZKSCAN8Q15776 578 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-206ENST00000412056 PHKG1Q16816 387 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 CMC1Q7Z7K0 106 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 TRIM73Q86UV7 250 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 FBXO39Q8N4B4 442 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 FBXO15Q8NCQ5 510 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-206ENST00000412056 AGBL5Q8NDL9 886 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 OR9A1PQ8NGU1 263 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 FLVCR1-AS1Q8TAF5 88 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.5□□□□□ -0.253e-13■■■■■ 108.9
CPNE1-206ENST00000412056 TSPAN17Q96FV3 270 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 OR2A14Q96R47 310 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 CD180Q99467 661 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 PKP4Q99569 1192 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 CMKLR1Q99788 373 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 RAB11FIP5Q9BXF6 653 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 UNKQ9C0B0 810 aaKnown RBP13.5□□□□□ -0.25
CPNE1-206ENST00000412056 TWSG1Q9GZX9 223 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 ZNF768Q9H5H4 540 aaKnown RBP13.5□□□□□ -0.25
CPNE1-206ENST00000412056 SYTL2Q9HCH5 934 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 OCIAD1Q9NX40 245 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 PISDQ9UG56 409 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 PDE10AQ9Y233 779 aa13.5□□□□□ -0.25
CPNE1-206ENST00000412056 MDC1Q14676 2089 aaKnown RBP13.5□□□□□ -0.25
CPNE1-206ENST00000412056 SDK2Q58EX2 2172 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 EXOC1LA0A1B0GW35 172 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 NPEPPSL1A6NEC2 478 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 EFCAB7A8K855 629 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 ISM1B1AKI9 464 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 MATN2O00339 956 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 TOX3O15405 576 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-206ENST00000412056 BRINP1O60477 761 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 C8GP07360 202 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 INHBAP08476 426 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 JMJD7P0C870 316 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 ERGP11308 486 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 PVRP15151 417 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 CDH3P22223 829 aa13.49□□□□□ -0.25
CPNE1-206ENST00000412056 MAP4P27816 1152 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms