RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 SH3KBP1Q96B97 665 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 HIST1H2AHQ96KK5 128 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 CNDP2Q96KP4 475 aaKnown RBP15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 NRTNQ99748 197 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 HIST1H2AJQ99878 128 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 MRPL57Q9BQC6 102 aaKnown RBP15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 H2AFJQ9BTM1 129 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 TRIM54Q9BYV2 358 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 C12orf65Q9H3J6 166 aaKnown RBP15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 NUDT4Q9NZJ9 180 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 SPATA7Q9P0W8 599 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 CPSF2Q9P2I0 782 aaKnown RBP15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 LRIT1Q9P2V4 623 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 FTSJ1Q9UET6 329 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 GRID1Q9ULK0 1009 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 PADI4Q9UM07 663 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 ICKQ9UPZ9 632 aa15.32■□□□□ 0.04
AP001056.1-201ENST00000411956 EME2A4GXA9 379 aaPredicted RBP15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 NCF1BA6NI72 391 aaPredicted RBP15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 LILRA5A6NI73 299 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 RHPN2P1A8MT19 583 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 SYCE1LA8MT33 242 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 NCF1CA8MVU1 366 aaPredicted RBP15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 UBXN8O00124 270 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 PRPF4O43172 522 aaKnown RBP eCLIP15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 KDM1AO60341 852 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 PLIN3O60664 434 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 GUCA1CO95843 209 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 PROCP04070 461 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 ERGP11308 486 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 CKMT1AP12532 417 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 MTHFD2P13995 350 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 NCF1P14598 390 aaPredicted RBP15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 DAB2P98082 770 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 NR1D2Q14995 579 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 CCDC153Q494R4 210 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 GUSBP11Q6P575 273 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 PDPRQ8NCN5 879 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 OR6C4Q8NGE1 309 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 CCDC74AQ96AQ1 378 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 CCDC138Q96M89 665 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 IL17FQ96PD4 163 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 SLC38A3Q99624 504 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 RAB11FIP5Q9BXF6 653 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 TBC1D10AQ9BXI6 508 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 XKR8Q9H6D3 395 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 ARL15Q9NXU5 204 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 SLC17A7Q9P2U7 560 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 PLLPQ9Y342 182 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 FRYLO94915 3013 aa15.31■□□□□ 0.04
AP001056.1-201ENST00000411956 TARM1B6A8C7 271 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 CBFA2T3O75081 653 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 LDOC1O95751 146 aaPredicted RBP15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 SLC16A8O95907 504 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 ANXA5P08758 320 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 IMPA1P29218 277 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 SHMT2P34897 504 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 RPA3P35244 121 aaPredicted RBP15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 RAB28P51157 221 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 PERM1Q5SV97 790 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 EFL1Q7Z2Z2 1120 aaKnown RBP15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 KIAA2013Q8IYS2 634 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 LMNTD1Q8N9Z9 388 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 ZNF480Q8WV37 535 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 LCN9Q8WX39 176 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 NAT6Q93015 286 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 FBXL8Q96CD0 374 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 FAM111AQ96PZ2 611 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 EGFL8Q99944 293 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 EVA1BQ9NVM1 165 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 CD274Q9NZQ7 290 aa15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 STOX2Q9P2F5 926 aaPredicted RBP15.3■□□□□ 0.04
AP001056.1-201ENST00000411956 OTOGLQ3ZCN5 2332 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 TMEM120BA0PK00 339 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 CPED1A4D0V7 1026 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 FAM221BA6H8Z2 402 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 KLK8O60259 260 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 S100BP04271 92 aaPredicted RBP15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 PNLIPP16233 465 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 DUSP3P51452 185 aaPredicted RBP15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 PNLIPRP1P54315 467 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 EPHA4P54764 986 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 CYP2A13Q16696 494 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 CDKL4Q5MAI5 379 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 PIP4P1Q86T03 277 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 ALYREFQ86V81 257 aaKnown RBP15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 AMIGO1Q86WK6 493 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 RAB42Q8N4Z0 105 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 LINC01555Q8NAE3 123 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 PPFIBP2Q8ND30 876 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 ARMC2Q8NEN0 867 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 OR2L8Q8NGY9 312 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 IFI44Q8TCB0 444 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 NETO1Q8TDF5 533 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 RHBDF1Q96CC6 855 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 SELENOSQ9BQE4 189 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 TMEM79Q9BSE2 394 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 KCNK9Q9NPC2 374 aa15.29■□□□□ 0.04
AP001056.1-201ENST00000411956 MED4Q9NPJ6 270 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms