RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 SLC38A9Q8NBW4 561 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 HJURPQ8NCD3 748 aaPredicted RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 OR10S1Q8NGN2 331 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TBC1D16Q8TBP0 767 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 PTPMT1Q8WUK0 201 aaPredicted RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 CCDC107Q8WV48 283 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 FAM162AQ96A26 154 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TMCO6Q96DC7 493 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TMEM19Q96HH6 336 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 RADILQ96JH8 1075 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 C3orf30Q96M34 536 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 PARK7Q99497 189 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 SLC25A23Q9BV35 468 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 DEFB129Q9H1M3 183 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 OR10A4Q9H209 315 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 LRMDAQ9H2I8 198 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 SLCO5A1Q9H2Y9 848 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 C6orf106Q9H6K1 298 aaPredicted RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 MMP25Q9NPA2 562 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 MTMR10Q9NXD2 777 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TAS2R14Q9NYV8 317 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 RCC2Q9P258 522 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 LARSQ9P2J5 1176 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 OSGIN1Q9UJX0 560 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 PLAGL1Q9UM63 463 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 YIPF1Q9Y548 306 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 PCDHGA5Q9Y5G8 931 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TRIOBPQ9H2D6 2365 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 BCORQ6W2J9 1755 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 MED23Q9ULK4 1368 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ARFGEF2Q9Y6D5 1785 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 LOC102723996A0A087X1L8 192 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 A0A1B0GVT2 93 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 A8MXE2 369 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 I6L893 689 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ACOT8O14734 319 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PAPSS1O43252 624 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 UFL1O94874 794 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CAVIN2O95810 425 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 FDPSP14324 419 aaKnown RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PFKFB1P16118 471 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TRIM21P19474 475 aaKnown RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CDKN2AP42771 156 aaKnown RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CCR3P51677 355 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ART1P52961 327 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TUBA1BP68363 451 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PITX1P78337 314 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CDK3Q00526 305 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 EEF1A2Q05639 463 aaKnown RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SCN1BQ07699 218 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 COG2Q14746 738 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PTPRCAPQ14761 206 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SYT16Q17RD7 645 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 KIF19Q2TAC6 998 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ODF2Q5BJF6 829 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PDSS1Q5T2R2 415 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SUSD4Q5VX71 490 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 C18orf63Q68DL7 685 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PACS1Q6VY07 963 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 C9orf47Q6ZRZ4 202 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ERN2Q76MJ5 926 aaKnown RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 IRF2BP2Q7Z5L9 587 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CAMKMTQ7Z624 323 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SLFN11Q7Z7L1 901 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 LDB1Q86U70 411 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 METTL23Q86XA0 190 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ERO1BQ86YB8 467 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MAP7D3Q8IWC1 876 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 GPALPP1Q8IXQ4 340 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 C4orf19Q8IY42 314 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 DCP1BQ8IZD4 617 aaKnown RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SCML4Q8N228 414 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MOSPD2Q8NHP6 518 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 U2AF1L4Q8WU68 220 aaKnown RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SECTM1Q8WVN6 248 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TEKT4Q8WW24 435 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TANKQ92844 425 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PHF21AQ96BD5 680 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SPACA9Q96E40 222 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PGAP3Q96FM1 320 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 BICD1Q96G01 975 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 MED30Q96HR3 178 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 EGLN2Q96KS0 407 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SFXN2Q96NB2 322 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CTAGE1Q96RT6 745 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SRSF8Q9BRL6 282 aaKnown RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 HGH1Q9BTY7 390 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 WNT5BQ9H1J7 359 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 ANKZF1Q9H8Y5 726 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 PANK3Q9H999 370 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 UBTD1Q9HAC8 227 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 HHATLQ9HCP6 504 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 CD93Q9NPY3 652 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TCP11L1Q9NUJ3 509 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 HYPKQ9NX55 129 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 TMOD2Q9NZR1 351 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 DBF4Q9UBU7 674 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 SLC9A2Q9UBY0 812 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 RASAL2Q9UJF2 1139 aa2.52□□□□□ -2.01
RNU6-1140P-201ENST00000410517 WBP11Q9Y2W2 641 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms