RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 LOC730098B7Z3J9 87 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 WNT9AO14904 365 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 PRMT3O60678 531 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 PSIP1O75475 530 aaKnown RBP13.25□□□□□ -0.29
LIMS1-205ENST00000410093 GMNNO75496 209 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 RNASEH2AO75792 299 aaKnown RBP13.25□□□□□ -0.29
LIMS1-205ENST00000410093 CATP04040 527 aaKnown RBP13.25□□□□□ -0.29
LIMS1-205ENST00000410093 ELFN1P0C7U0 828 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 HSD3B1P14060 373 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 SLC2A4P14672 509 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 ARSAP15289 507 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 HSD3B2P26439 372 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 PRLHRP49683 370 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 NME5P56597 212 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 CREB5Q02930 508 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 ADAM15Q13444 863 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 COL19A1Q14993 1142 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 LRRC36Q1X8D7 754 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 ERMP1Q7Z2K6 904 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 ADGRD2Q7Z7M1 963 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 DSG4Q86SJ6 1040 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 PAPD5Q8NDF8 572 aaKnown RBP13.25□□□□□ -0.29
LIMS1-205ENST00000410093 UCMAQ8WVF2 138 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 OR8D1Q8WZ84 308 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 STARD8Q92502 1023 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 ELMO1Q92556 727 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 GLYATL1Q969I3 302 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 TMEM159Q96B96 161 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 TRAPPC9Q96Q05 1148 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 OSBPL11Q9BXB4 747 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 DPY30Q9C005 99 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 SFXN1Q9H9B4 322 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 TRPV4Q9HBA0 871 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 DZANK1Q9NVP4 752 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 GDE1Q9NZC3 331 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 NDUFA13Q9P0J0 144 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 DLGAP2Q9P1A6 1054 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 KLQ9UEF7 1012 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 GIMAP2Q9UG22 337 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 CD207Q9UJ71 328 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 TMPRSS11EQ9UL52 423 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 PCDHB3Q9Y5E6 796 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 HCFC2Q9Y5Z7 792 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 TULP3O75386 442 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 G6PDP11413 515 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 IL9P15248 144 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 MSX2P35548 267 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-205ENST00000410093 GRIA3P42263 894 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 GSK3BP49841 420 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 CHN2P52757 468 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 LIPEQ05469 1076 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 CSTF3Q12996 717 aaKnown RBP13.24□□□□□ -0.29
LIMS1-205ENST00000410093 PDK3Q15120 406 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 DPY19L1Q2PZI1 675 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 BCL7AQ4VC05 210 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 RFTN2Q52LD8 501 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-205ENST00000410093 INTS11Q5TA45 600 aaKnown RBP13.24□□□□□ -0.29
LIMS1-205ENST00000410093 NANOGP8Q6NSW7 305 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 LIPIQ6XZB0 460 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 Q6ZVL8 140 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 ETFBKMTQ8IXQ9 262 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 TBC1D21Q8IYX1 336 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 LILRA2Q8N149 483 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 NAT16Q8N8M0 369 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 FAM156AQ8NDB6 213 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 OR52E4Q8NGH9 312 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 CSGALNACT1Q8TDX6 532 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 CYB5D2Q8WUJ1 264 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 SMARCD2Q92925 531 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 RAB7BQ96AH8 199 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-205ENST00000410093 CMTM7Q96FZ5 175 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 CCM2Q9BSQ5 444 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 C1orf50Q9BV19 199 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 ELOVL6Q9H5J4 265 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 NANOGQ9H9S0 305 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 DEC1Q9P2X7 70 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 KIF26AQ9ULI4 1882 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-205ENST00000410093 KIAA1549LQ6ZVL6 1849 aa13.24□□□□□ -0.29
LIMS1-205ENST00000410093 ASPDHA6ND91 283 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 LINC01565O15544 149 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 SEC22BO75396 215 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 ERN1O75460 977 aaKnown RBP13.23□□□□□ -0.29
LIMS1-205ENST00000410093 JUPP14923 745 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 FASP25445 335 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 HNF4AP41235 474 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 HTR6P50406 440 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 RPL38P63173 70 aaKnown RBP13.23□□□□□ -0.29
LIMS1-205ENST00000410093 NTHL1P78549 312 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 DPTQ07507 201 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 SMAD4Q13485 552 aaKnown RBP13.23□□□□□ -0.29
LIMS1-205ENST00000410093 ELAVL3Q14576 367 aaKnown RBP13.23□□□□□ -0.29
LIMS1-205ENST00000410093 C18orf21Q32NC0 220 aaPredicted RBP13.23□□□□□ -0.29
LIMS1-205ENST00000410093 HNRNPA1L2Q32P51 320 aaKnown RBP13.23□□□□□ -0.29
LIMS1-205ENST00000410093 SYTL3Q4VX76 610 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 TIGD2Q4W5G0 525 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 PAGE3Q5JUK9 113 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 OR52E8Q6IFG1 317 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 SCIMPQ6UWF3 145 aa13.23□□□□□ -0.29
LIMS1-205ENST00000410093 GJD3Q8N144 294 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms