RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 TMEM231Q9H6L2 316 aa5.15□□□□□ -1.58
R3HDM1-204ENST00000410054 TPT1P8Q9HAU6 139 aa5.15□□□□□ -1.58
R3HDM1-204ENST00000410054 ABCC13Q9NSE7 274 aa5.15□□□□□ -1.58
R3HDM1-204ENST00000410054 SUPT6HQ7KZ85 1726 aaKnown RBP5.15□□□□□ -1.58
R3HDM1-204ENST00000410054 ZNF532Q9HCE3 1301 aa5.15□□□□□ -1.58
R3HDM1-204ENST00000410054 PNMA6EA0A0J9YXQ4 647 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 AQP12BA6NM10 295 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 MCIDASD6RGH6 385 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 LEFTY2O00292 366 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 MANBAO00462 879 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PDE6DO43924 150 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 RP2O75695 350 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PAK4O96013 591 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 F7P08709 466 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PIM1P11309 404 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 GNSP15586 552 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PRKACGP22612 351 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PTPN4P29074 926 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 CDC25AP30304 524 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 IL15P40933 162 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ZNF157P51786 506 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 CLCN4P51793 760 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 EMP1P54849 157 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 CTSWP56202 376 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 KCNQ4P56696 695 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 BLOC1S1P78537 153 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 GNA12Q03113 381 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 LCP2Q13094 533 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PKP1Q13835 747 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 TRIP4Q15650 581 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ZNF174Q15697 407 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SMAD2Q15796 467 aaKnown RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 TCEAL5Q5H9L2 206 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 KIAA1211LQ6NV74 962 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 TRAPPC11Q7Z392 1133 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 RAB44Q7Z6P3 723 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 IL17RCQ8NAC3 791 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 TMEM145Q8NBT3 493 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ZSCAN18Q8TBC5 510 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SCARB1Q8WTV0 552 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SNAPC3Q92966 411 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SPACA9Q96E40 222 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ZNF274Q96GC6 653 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 FUBP3Q96I24 572 aaKnown RBP eCLIP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 MACROD1Q9BQ69 325 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ECSITQ9BQ95 431 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SYT15Q9BQS2 421 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ZNF559Q9BR84 538 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 MED18Q9BUE0 208 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PBDC1Q9BVG4 233 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SUCNR1Q9BXA5 334 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ZNF518BQ9C0D4 1074 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ACTR6Q9GZN1 396 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 WWTR1Q9GZV5 400 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 CLMPQ9H6B4 373 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SMURF1Q9HCE7 757 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 RNF146Q9NTX7 359 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 VPS54Q9P1Q0 977 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC7A8Q9UHI5 535 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PCDHB10Q9UN67 800 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 MEIS3P2A8K0S8 358 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 GRM8O00222 908 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 NR5A2O00482 541 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 FANCGO15287 622 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SDC3O75056 442 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 GGCTO75223 188 aaKnown RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 ZBTB7AO95365 584 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 VNN2O95498 520 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 CA3P07451 260 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 THBS1P07996 1170 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 UCHL3P15374 230 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 GRK5P34947 590 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 CSKP41240 450 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 GUCA1AP43080 201 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 DGKGP49619 791 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 RNF144AP50876 292 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 EPHA5P54756 1037 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 RPL23AP62750 156 aaKnown RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 GPC5P78333 572 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 NKX6-1P78426 367 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 GAD2Q05329 585 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 MAB21L1Q13394 359 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 DUSP6Q16828 381 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SUPT20HL1Q3ZLR7 823 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PRAMEF8Q5VWM4 474 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PRAMEF7Q5VXH5 474 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SHEQ5VZ18 495 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 PRR27Q6MZM9 219 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SEZ6L2Q6UXD5 910 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 RNF44Q7L0R7 432 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 C16orf71Q8IYS4 520 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 RCOR2Q8IZ40 523 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 APCDD1Q8J025 514 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC25A41Q8N5S1 370 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 EIF4E3Q8N5X7 224 aaKnown RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 OR5L2Q8NGL0 311 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 LHFPL5Q8TAF8 219 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SH3RF3Q8TEJ3 882 aaPredicted RBP5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 CHTF18Q8WVB6 975 aa5.15□□□□□ -1.59
R3HDM1-204ENST00000410054 SLC35B4Q969S0 331 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms